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1MVR

Decoding center & peptidyl transferase center from the x-ray structure of the thermus thermophilus 70s ribosome, aligned to the low resolution cryo-em map of e.coli 70s ribosome

PDB DOI: 10.2210/pdb1mvr/pdb

Classification: RIBOSOME
Organism(s): Escherichia Coli

Deposited: 2002-09-26
Deposition Author(s): Ehrenberg, M. , Frank, J. , Grassucci, R.A. , Linde, J. , Rawat, U.B. , Sengupta, J. , Valle, M. , Vestergaard, B. , Zavialov, A.V.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 12.8 Å

1mvr
Literature

Decoding center & peptidyl transferase center from the x-ray structure of the thermus thermophilus 70s ribosome, aligned to the low resolution cryo-em map of e.coli 70s ribosome

Ehrenberg, M. , Frank, J. , Grassucci, R.A. , Linde, J. , Rawat, U.B. , Sengupta, J. , Valle, M. , Vestergaard, B. , Zavialov, A.V.

Primary Citation of Related Structures: 1MVR


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
mRNA, triplet codon (A-site) 1 3 NA UUU
Helix 34 of 16S rRNA a 45 NA AGGUGCUGCAUGGCCGUCGUCAACGACGUCUGGUCAGCAUGGCCC
Helix 44 of 16S rRNA b 96 NA CGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAA
Helix 69 of 23S rRNA c 19 NA GGCCGUAACUAUAACGGUC
Helix 89 of 23S rRNA d 59 NA AUAACAGGCUGAUCUCCCCCGAGCGUCCACAGCGGCGGGGAGGUUUGGCACCUCGAUGU
Helix 93 of 23S rRNA e 27 NA GUUCAGAACGUCGUGAGACAGUUCGGU

Proteins
Molecule Chains Sequence Length Organism Sequence
30S RIBOSOMAL PROTEIN S12 O 135 Escherichia Coli MVALPTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAAKTAAKK
50S ribosomal protein L11 L 140 Escherichia Coli AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVVD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2002-09-26
Deposition Author(s): Ehrenberg, M. , Frank, J. , Grassucci, R.A. , Linde, J. , Rawat, U.B. , Sengupta, J. , Valle, M. , Vestergaard, B. , Zavialov, A.V.