PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

1MJI

Detailed analysis of rna-protein interactions within the bacterial ribosomal protein l5/5s rrna complex

PDB DOI: 10.2210/pdb1mji/pdb

Classification: RIBOSOME
Organism(s): Escherichia Coli , Thermus Thermophilus

Deposited: 2002-08-28
Deposition Author(s): Dumas, P. , Garber, M. , Gongadze, G. , Nevskaya, N. , Nikonov, O. , Nikonov, S. , Nikulin, A. , Perederina, A. , Tanaka, I. , Yao, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

1mji
Literature

Detailed analysis of rna-protein interactions within the bacterial ribosomal protein l5/5s rrna complex

Dumas, P. , Garber, M. , Gongadze, G. , Nevskaya, N. , Nikonov, O. , Nikonov, S. , Nikulin, A. , Perederina, A. , Tanaka, I. , Yao, M.

Primary Citation of Related Structures: 1MJI


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5S rRNA fragment c 34 NA GGCACCUGACCCCAUGCCGAACUCAGAAGUGCCC
5S rRNA fragment d 34 NA GGCACCUGACCCCAUGCCGAACUCAGAAGUGCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
50S ribosomal protein L5 A 182 Escherichia Coli , Thermus Thermophilus MPLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK
50S ribosomal protein L5 B 182 Escherichia Coli , Thermus Thermophilus MPLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-08-28
Deposition Author(s): Dumas, P. , Garber, M. , Gongadze, G. , Nevskaya, N. , Nikonov, O. , Nikonov, S. , Nikulin, A. , Perederina, A. , Tanaka, I. , Yao, M.