PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

1MDM

Inhibited fragment of ets-1 and paired domain of pax5 bound to dna

PDB DOI: 10.2210/pdb1mdm/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct

Deposited: 2002-08-07
Deposition Author(s): Garvie, C.W. , Graves, B.J. , Pufall, M.A. , Wolberger, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

1mdm
Literature

Inhibited fragment of ets-1 and paired domain of pax5 bound to dna

Garvie, C.W. , Graves, B.J. , Pufall, M.A. , Wolberger, C.

Primary Citation of Related Structures: 1MDM


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER c 26 NA TTGCCGGAGATGGGCTCCAGTGGCCT
PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER d 26 NA AAGGCCACTGGAGCCCATCTCCGGCA

Proteins
Molecule Chains Sequence Length Organism Sequence
PAIRED BOX PROTEIN PAX-5 A 149 Homo Sapiens , Mus Musculus , Synthetic Construct MDLEKNYPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKVQQPPNQ
C-ETS-1 PROTEIN B 161 Homo Sapiens , Mus Musculus , Synthetic Construct VPSYDSFDYEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDAD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-08-07
Deposition Author(s): Garvie, C.W. , Graves, B.J. , Pufall, M.A. , Wolberger, C.