1M5P
Transition state stabilization by a catalytic rna
PDB DOI: 10.2210/pdb1m5p/pdb
Classification: TRANSLATION/RNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2002-07-09 Deposition Author(s): Ferre-D'Amare, A.R. , Massey, A. , Rupert, P.B. , Sigurdsson, S.T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Transition state stabilization by a catalytic rna
Ferre-D'Amare, A.R. , Massey, A. , Rupert, P.B. , Sigurdsson, S.T.
Primary Citation of Related Structures: 1M5P
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA INHIBITOR SUBSTRATE | a | 12 | NA | GGCCACCUGACA |
| RNA INHIBITOR SUBSTRATE | d | 12 | NA | GGCCACCUGACA |
| RNA INHIBITOR SUBSTRATE | m | 9 | NA | GUCCUCUCC |
| RNA INHIBITOR SUBSTRATE | p | 9 | NA | GUCCUCUCC |
| RNA HAIRPIN RIBOZYME | b | 92 | NA | GGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG |
| RNA HAIRPIN RIBOZYME | e | 92 | NA | GGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A | C | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGT |
| U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A | F | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2002-07-09 Deposition Author(s): Ferre-D'Amare, A.R. , Massey, A. , Rupert, P.B. , Sigurdsson, S.T.