1M5K
Crystal structure of a hairpin ribozyme in the catalytically-active conformation
PDB DOI: 10.2210/pdb1m5k/pdb
Classification: TRANSLATION/RNA Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2002-07-09 Deposition Author(s): Ferre-D'Amare, A.R. , Rupert, P.B.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.4 Å
Crystal structure of a hairpin ribozyme in the catalytically-active conformation
Ferre-D'Amare, A.R. , Rupert, P.B.
Primary Citation of Related Structures: 1M5K
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA INHIBITOR SUBSTRATE | a | 21 | NA | GGCCACCUGACAGUCCUCUCC |
| RNA INHIBITOR SUBSTRATE | d | 21 | NA | GGCCACCUGACAGUCCUCUCC |
| RNA HAIRPIN RIBOZYME | b | 92 | NA | GGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG |
| RNA HAIRPIN RIBOZYME | e | 92 | NA | GGAGAGAGAAGUCAACCAGAGAAACACACCAACCCAUUGCACUCCGGGUUGGUGGUAUAUUACCUGGUACGGGGGAAACUUCGUGGUGGCCG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A) | C | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGT |
| PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A) | F | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2002-07-09 Deposition Author(s): Ferre-D'Amare, A.R. , Rupert, P.B.