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FASTA Sequence PDB Format mmCIF Format
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1M18

Ligand binding alters the structure and dynamics of nucleosomal dna

PDB DOI: 10.2210/pdb1m18/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Xenopus Laevis , Synthetic Construct

Deposited: 2002-06-18
Deposition Author(s): Dervan, P.B. , Edayathumangalam, R.S. , Gottesfeld, J.M. , Luger, K. , Melander, C. , Suto, R.K. , White, C.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.45 Å

1m18
Literature

Ligand binding alters the structure and dynamics of nucleosomal dna

Dervan, P.B. , Edayathumangalam, R.S. , Gottesfeld, J.M. , Luger, K. , Melander, C. , Suto, R.K. , White, C.L.

Primary Citation of Related Structures: 1M18


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Palindromic 146 Base Pair DNA Fragment i 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
Palindromic 146 Base Pair DNA Fragment j 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT

Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 135 Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.2 E 135 Xenopus Laevis , Synthetic Construct ARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Xenopus Laevis , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A.1 C 129 Xenopus Laevis , Synthetic Construct SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK
Histone H2A.1 G 129 Xenopus Laevis , Synthetic Construct SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESAKSAKSK
Histone H2B.1 D 125 Xenopus Laevis , Synthetic Construct PEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B.1 H 125 Xenopus Laevis , Synthetic Construct PEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-06-18
Deposition Author(s): Dervan, P.B. , Edayathumangalam, R.S. , Gottesfeld, J.M. , Luger, K. , Melander, C. , Suto, R.K. , White, C.L.