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1LEI

The kb dna sequence from the hlv-ltr functions as an allosteric regulator of hiv transcription

PDB DOI: 10.2210/pdb1lei/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2002-04-09
Deposition Author(s): Chen-Park, F. , Ghosh, G. , Huang, D.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

1lei
Literature

The kb dna sequence from the hlv-ltr functions as an allosteric regulator of hiv transcription

Chen-Park, F. , Ghosh, G. , Huang, D.B.

Primary Citation of Related Structures: 1LEI


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*TP*CP*AP*GP*GP*GP*AP*AP*AP*GP*TP*AP*CP*AP*GP*A)-3' c 17 NA CTCAGGGAAAGTACAGA
5'-D(*TP*CP*TP*GP*5ITP*AP*CP*5ITP*5ITP*5ITP*CP*CP*CP*TP*GP*AP*G)-3' d 17 NA TCTGUACUUUCCCTGAG

Proteins
Molecule Chains Sequence Length Organism Sequence
NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT A 274 Mus Musculus , Synthetic Construct MAYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD
NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT B 313 Mus Musculus , Synthetic Construct MGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2002-04-09
Deposition Author(s): Chen-Park, F. , Ghosh, G. , Huang, D.B.