Crystal structure of a nf-kb heterodimer bound to an ifnb-kb
PDB DOI: 10.2210/pdb1le5/pdb
Classification: TRANSCRIPTION/DNA
Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2002-04-09
Deposition Author(s): Berkowitz, B. , Chen-Park, F.E. , Ghosh, G. , Huang, D.B. , Sigler, P.B.
Crystal structure of a nf-kb heterodimer bound to an ifnb-kb
Berkowitz, B. , Chen-Park, F.E. , Ghosh, G. , Huang, D.B. , Sigler, P.B.
Primary Citation of Related Structures: 1LE5
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3' | c | 12 | NA | TGGGAAATTCCT |
5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3' | g | 12 | NA | TGGGAAATTCCT |
5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3' | d | 12 | NA | AAGGAATTTCCC |
5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3' | h | 12 | NA | AAGGAATTTCCC |
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Nuclear factor NF-kappa-B p65 subunit | A | 274 | Mus Musculus , Synthetic Construct | MAYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD |
Nuclear factor NF-kappa-B p65 subunit | E | 274 | Mus Musculus , Synthetic Construct | MAYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD |
Nuclear factor NF-kappa-B p50 subunit | B | 313 | Mus Musculus , Synthetic Construct | MGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE |
Nuclear factor NF-kappa-B p50 subunit | F | 313 | Mus Musculus , Synthetic Construct | MGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE |
Method: X-RAY DIFFRACTION
Deposited Date: 2002-04-09
Deposition Author(s): Berkowitz, B. , Chen-Park, F.E. , Ghosh, G. , Huang, D.B. , Sigler, P.B.