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1L3L
Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and dna
PDB DOI: 10.2210/pdb1l3l/pdb
Classification: TRANSCRIPTION/DNA Organism(s): Ectromelia Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2002-02-27 Deposition Author(s): Anderson, J.C. , Bashkin, J.K. , Brace, J.L. , Joachimiak, A. , Miller, P.C. , Molyneaux, J.M. , Oulmassov, T. , Pappas, T. , Winans, S.C. , Zhang, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.66 Å
Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and dna
Anderson, J.C. , Bashkin, J.K. , Brace, J.L. , Joachimiak, A. , Miller, P.C. , Molyneaux, J.M. , Oulmassov, T. , Pappas, T. , Winans, S.C. , Zhang, R.
Primary Citation of Related Structures: 1L3L
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3' | e | 20 | NA | GATGTGCAGATCTGCACATC |
| 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3' | f | 20 | NA | GATGTGCAGATCTGCACATC |
| 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3' | g | 20 | NA | GATGTGCAGATCTGCACATC |
| 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3' | h | 20 | NA | GATGTGCAGATCTGCACATC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transcriptional activator protein traR | A | 234 | Ectromelia Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MQHWLDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHRQWQSTYFDKKFEALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI |
| Transcriptional activator protein traR | B | 234 | Ectromelia Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MQHWLDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHRQWQSTYFDKKFEALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI |
| Transcriptional activator protein traR | C | 234 | Ectromelia Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MQHWLDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHRQWQSTYFDKKFEALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI |
| Transcriptional activator protein traR | D | 234 | Ectromelia Virus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MQHWLDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHRQWQSTYFDKKFEALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2002-02-27 Deposition Author(s): Anderson, J.C. , Bashkin, J.K. , Brace, J.L. , Joachimiak, A. , Miller, P.C. , Molyneaux, J.M. , Oulmassov, T. , Pappas, T. , Winans, S.C. , Zhang, R.