1KOG
Crystal structure of e. coli threonyl-trna synthetase interacting with the essential domain of its mrna operator
PDB DOI: 10.2210/pdb1kog/pdb
Classification: LIGASE/RNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2001-12-20 Deposition Author(s): Caillet, J. , Dock-Bregeon, A.C. , Ehresmann, B. , Ehresmann, C. , Moras, D. , Rees, B. , Romby, P. , Sankaranarayanan, R. , Springer, M. , Torres-Larrios, A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.5 Å
Crystal structure of e. coli threonyl-trna synthetase interacting with the essential domain of its mrna operator
Caillet, J. , Dock-Bregeon, A.C. , Ehresmann, B. , Ehresmann, C. , Moras, D. , Rees, B. , Romby, P. , Sankaranarayanan, R. , Springer, M. , Torres-Larrios, A.
Primary Citation of Related Structures: 1KOG
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Threonyl-tRNA synthetase mRNA | i | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | j | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | k | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | l | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | m | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | n | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | o | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Threonyl-tRNA synthetase mRNA | p | 37 | NA | GGCGUAUGUGAUCUUUCGUGUGGGUCACCACUGCGCC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Threonyl-tRNA synthetase | A | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | B | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | C | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | D | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | E | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | F | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | G | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
| Threonyl-tRNA synthetase | H | 401 | Escherichia Coli , Synthetic Construct | RDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2001-12-20 Deposition Author(s): Caillet, J. , Dock-Bregeon, A.C. , Ehresmann, B. , Ehresmann, C. , Moras, D. , Rees, B. , Romby, P. , Sankaranarayanan, R. , Springer, M. , Torres-Larrios, A.