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1KFV

Crystal structure of lactococcus lactis formamido-pyrimidine dna glycosylase (alias fpg or mutm) non covalently bound to an ap site containing dna.

PDB DOI: 10.2210/pdb1kfv/pdb

Classification: HYDROLASE/DNA
Organism(s): Lactococcus Lactis , Synthetic Construct

Deposited: 2001-11-23
Deposition Author(s): Boiteux, S. , Castaing, B. , Pereira De Jesus, K. , Serre, L. , Zelwer, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å

Literature

Crystal structure of lactococcus lactis formamido-pyrimidine dna glycosylase (alias fpg or mutm) non covalently bound to an ap site containing dna.

Boiteux, S. , Castaing, B. , Pereira De Jesus, K. , Serre, L. , Zelwer, C.

Primary Citation of Related Structures: 1KFV


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*C)-3' d 13 NA CTCTTTXTTTCTC
5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*C)-3' g 13 NA CTCTTTXTTTCTC
5'-D(*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*AP*G)-3' e 13 NA GAGAAACAAAGAG
5'-D(*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*AP*G)-3' h 13 NA GAGAAACAAAGAG

Proteins
Molecule Chains Sequence Length Organism Sequence
Formamido-pyrimidine DNA glycosylase A 271 Lactococcus Lactis , Synthetic Construct GELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK
Formamido-pyrimidine DNA glycosylase B 271 Lactococcus Lactis , Synthetic Construct GELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2001-11-23
Deposition Author(s): Boiteux, S. , Castaing, B. , Pereira De Jesus, K. , Serre, L. , Zelwer, C.