1K4S
Human dna topoisomerase i in covalent complex with a 22 base pair dna duplex
PDB DOI: 10.2210/pdb1k4s/pdb
Classification: ISOMERASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2001-10-08 Deposition Author(s): Behnke, C.A. , Burgin Jr., A.B. , Feese, M.D. , Hjerrild, K. , Staker, B.L. , Stewart, L.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.2 Å
Human dna topoisomerase i in covalent complex with a 22 base pair dna duplex
Behnke, C.A. , Burgin Jr., A.B. , Feese, M.D. , Hjerrild, K. , Staker, B.L. , Stewart, L.J.
Primary Citation of Related Structures: 1K4S
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*(5IU)P*(5IU))-3' | b | 10 | NA | AAAAAGACUU |
| 5'-D(*(SPT)P*GP*AP*AP*AP*AP*AP*(5IU)P*(5IU)P*(5IU)P*(5IU)P*T)-3' | c | 12 | NA | TGAAAAAUUUUT |
| 5'-D(*AP*AP*AP*AP*AP*TP*(IDO)UP*(IDO)UP*(IDO)UP*(IDO)UP*CP*AP*AP*AP*GP*(IDO)UP*CP*(IDO)UP*(IDO)UP*(IDO)UP*(IDO)UP*T)-3' | d | 22 | NA | AAAAATUUUUCAAAGUCUUUUT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA topoisomerase I | A | 592 | Homo Sapiens , Synthetic Construct | KKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2001-10-08 Deposition Author(s): Behnke, C.A. , Burgin Jr., A.B. , Feese, M.D. , Hjerrild, K. , Staker, B.L. , Stewart, L.J.