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1HJC
Crystal structure of runx-1/aml1/cbfalpha runt domain bound to a dna fragment from the csf-1r promoter
PDB DOI: 10.2210/pdb1hjc/pdb
Classification: TRANSCRIPTION/DNA Organism(s): Lucilia Cuprina , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2001-01-11 Deposition Author(s): Ogata, K. , Tahirov, T.H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.65 Å
Crystal structure of runx-1/aml1/cbfalpha runt domain bound to a dna fragment from the csf-1r promoter
Primary Citation of Related Structures: 1HJC
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RUNT-RELATED TRANSCRIPTION FACTOR 1 | A | 123 | Lucilia Cuprina , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK |
| RUNT-RELATED TRANSCRIPTION FACTOR 1 | D | 123 | Lucilia Cuprina , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3') | b | 16 | NA | GAACTCTGTGGTTGCG |
| DNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3') | e | 16 | NA | GAACTCTGTGGTTGCG |
| DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3') | c | 16 | NA | CCGCAACCACAGAGTT |
| DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3') | f | 16 | NA | CCGCAACCACAGAGTT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2001-01-11 Deposition Author(s): Ogata, K. , Tahirov, T.H.