Crystal structure of runx-1/aml1/cbfalpha runt domain and c/ebpbeta bzip homodimer bound to a dna fragment from the csf-1r promoter
PDB DOI: 10.2210/pdb1hjb/pdb
Classification: TRANSCRIPTION/DNA Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct
Deposited: 2001-01-11 Deposition Author(s): Ogata, K. , Tahirov, T.H.
Crystal structure of runx-1/aml1/cbfalpha runt domain and c/ebpbeta bzip homodimer bound to a dna fragment from the csf-1r promoter
Primary Citation of Related Structures: 1HJB
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
CCAAT/ENHANCER BINDING PROTEIN BETA | A | 87 | Homo Sapiens , Mus Musculus , Synthetic Construct | VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC |
CCAAT/ENHANCER BINDING PROTEIN BETA | B | 87 | Homo Sapiens , Mus Musculus , Synthetic Construct | VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC |
CCAAT/ENHANCER BINDING PROTEIN BETA | D | 87 | Homo Sapiens , Mus Musculus , Synthetic Construct | VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC |
CCAAT/ENHANCER BINDING PROTEIN BETA | E | 87 | Homo Sapiens , Mus Musculus , Synthetic Construct | VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC |
RUNT-RELATED TRANSCRIPTION FACTOR 1 | C | 123 | Homo Sapiens , Mus Musculus , Synthetic Construct | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK |
RUNT-RELATED TRANSCRIPTION FACTOR 1 | F | 123 | Homo Sapiens , Mus Musculus , Synthetic Construct | GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-(*GP*AP*AP*GP*AP*TP*TP*TP*CP*CP* AP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP*TP*TP*GP*CP*G)-3') | g | 26 | NA | GAAGATTTCCAAACTCTGTGGTTGCG |
DNA (5'-(*GP*AP*AP*GP*AP*TP*TP*TP*CP*CP* AP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP*TP*TP*GP*CP*G)-3') | i | 26 | NA | GAAGATTTCCAAACTCTGTGGTTGCG |
DNA (5'-(*CP*CP*GP*CP*AP*AP*CP*CP*AP*CP* AP*GP*AP*GP*TP*TP*TP*GP*GP*AP*AP*AP*TP*CP*TP*T)-3') | h | 26 | NA | CCGCAACCACAGAGTTTGGAAATCTT |
DNA (5'-(*CP*CP*GP*CP*AP*AP*CP*CP*AP*CP* AP*GP*AP*GP*TP*TP*TP*GP*GP*AP*AP*AP*TP*CP*TP*T)-3') | j | 26 | NA | CCGCAACCACAGAGTTTGGAAATCTT |
Method: X-RAY DIFFRACTION
Deposited Date: 2001-01-11 Deposition Author(s): Ogata, K. , Tahirov, T.H.