2.6 a crystal structure of a nucleosome core particle containing the variant histone h2a.z
PDB DOI: 10.2210/pdb1f66/pdb
Classification: STRUCTURAL PROTEIN/DNA Organism(s): Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct
Deposited: 2000-06-20 Deposition Author(s): Clarkson, M.J. , Luger, K. , Suto, R.K. , Tremethick, D.J.
2.6 a crystal structure of a nucleosome core particle containing the variant histone h2a.z
Clarkson, M.J. , Luger, K. , Suto, R.K. , Tremethick, D.J.
Primary Citation of Related Structures: 1F66
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
PALINDROMIC 146 BASE PAIR DNA FRAGMENT | i | 146 | NA | ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT |
PALINDROMIC 146 BASE PAIR DNA FRAGMENT | j | 146 | NA | ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT |
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
HISTONE H3 | A | 136 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MARTKQTARKSTGGKAPRKQLATKAARKSAPATGEVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
HISTONE H3 | E | 136 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MARTKQTARKSTGGKAPRKQLATKAARKSAPATGEVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
HISTONE H4 | B | 103 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
HISTONE H4 | F | 103 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
HISTONE H2A.Z | C | 128 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV |
HISTONE H2A.Z | G | 128 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV |
HISTONE H2B | D | 126 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MPEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
HISTONE H2B | H | 126 | Homo Sapiens , Mus Musculus , Xenopus Laevis , Synthetic Construct | MPEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK |
Method: X-RAY DIFFRACTION
Deposited Date: 2000-06-20 Deposition Author(s): Clarkson, M.J. , Luger, K. , Suto, R.K. , Tremethick, D.J.