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1EBM

Crystal structure of the human 8-oxoguanine glycosylase (hogg1) bound to a substrate oligonucleotide

PDB DOI: 10.2210/pdb1ebm/pdb

Classification: LYASE/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2000-01-24
Deposition Author(s): Bruner, S.D. , Norman, D.P. , Verdine, G.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

Literature

Crystal structure of the human 8-oxoguanine glycosylase (hogg1) bound to a substrate oligonucleotide

Bruner, S.D. , Norman, D.P. , Verdine, G.L.

Primary Citation of Related Structures: 1EBM


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3') c 15 NA GCGTCCAGGTCTACC
DNA (5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3') d 15 NA GGTAGACCTGGACGC

Proteins
Molecule Chains Sequence Length Organism Sequence
8-OXOGUANINE DNA GLYCOSYLASE A 317 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTQVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2000-01-24
Deposition Author(s): Bruner, S.D. , Norman, D.P. , Verdine, G.L.