1DE9
Human ape1 endonuclease with bound abasic dna and mn2+ ion
PDB DOI: 10.2210/pdb1de9/pdb
Classification: LYASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 1999-11-13 Deposition Author(s): Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Human ape1 endonuclease with bound abasic dna and mn2+ ion
Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.
Primary Citation of Related Structures: 1DE9
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-d(*CP*TP*AP*C)-3' | x | 4 | NA | CTAC |
| 5'-d(*CP*TP*AP*C)-3' | u | 4 | NA | CTAC |
| 5'-d(P*(3DR)P*GP*AP*TP*C)-3' | y | 5 | NA | NGATC |
| 5'-d(P*(3DR)P*GP*AP*TP*C)-3' | v | 5 | NA | NGATC |
| 5'-d(*GP*AP*TP*CP*GP*GP*TP*AP*G)-3' | z | 9 | NA | GATCGGTAG |
| 5'-d(*GP*AP*TP*CP*GP*GP*TP*AP*G)-3' | w | 9 | NA | GATCGGTAG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE | A | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDHKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
| MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE | B | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDHKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 1999-11-13 Deposition Author(s): Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.