1DE8
Human apurinic/apyrimidinic endonuclease-1 (ape1) bound to abasic dna
PDB DOI: 10.2210/pdb1de8/pdb
Classification: LYASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 1999-11-13 Deposition Author(s): Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.95 Å
Human apurinic/apyrimidinic endonuclease-1 (ape1) bound to abasic dna
Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.
Primary Citation of Related Structures: 1DE8
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*CP*TP*AP*CP*(3DR)P*GP*AP*TP*CP*G)-3') | x | 11 | NA | GCTACNGATCG |
| DNA (5'-D(*GP*CP*TP*AP*CP*(3DR)P*GP*AP*TP*CP*G)-3') | u | 11 | NA | GCTACNGATCG |
| DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3') | y | 11 | NA | CGATCGGTAGC |
| DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3') | v | 11 | NA | CGATCGGTAGC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE | B | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDHKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
| MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE | A | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDHKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 1999-11-13 Deposition Author(s): Izumi, T. , Mitra, S. , Mol, C.D. , Tainer, J.A.