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FASTA Sequence PDB Format mmCIF Format
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12SN

Sars-cov-2 rna-dependent rna polymerase in complex with 4'-fla nucleotide analogue

PDB DOI: 10.2210/pdb12sn/pdb

Classification: VIRAL PROTEIN/DNA
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2026-04-16
Deposition Author(s): Gharpure, A. , Park, S. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.38 Å

Literature

Sars-cov-2 rna-dependent rna polymerase in complex with 4'-fla nucleotide analogue

Gharpure, A. , Park, S. , Ward, A.B.

Primary Citation of Related Structures: 12SN


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase nsp12 A 975 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQGGSENLYFQGGGSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK
Non-structural protein 8 B 217 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQGGSENLYFQGHHHHHHHH
Non-structural protein 8 D 217 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQGGSENLYFQGHHHHHHHH
Non-structural protein 7 C 102 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQGGSENLYFQGHHHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*AP*UP*UP*AP*AP*GP*UP*UP*AP*U)-3') p 20 NA GCUAUGUGAGAUUAAGUUAU
RNA (5'-R(P*UP*AP*UP*AP*AP*CP*UP*UP*AP*AP*UP*C)-3') t 30 NA UUUUUUUUUUAUAACUUAAUCUCACAUAGC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2026-04-16
Deposition Author(s): Gharpure, A. , Park, S. , Ward, A.B.