PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

11OQ

Sars-cov-2 omicron ba.1 rbd in complex with omi32 germline fab and lc-kappa vhh

PDB DOI: 10.2210/pdb11oq/pdb

Classification: IMMUNE SYSTEM/Viral Protein
Organism(s): Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2026-03-06
Deposition Author(s): Catalano, C. , Kang, G. , Phillips, A.M. , Scapin, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Literature

Sars-cov-2 omicron ba.1 rbd in complex with omi32 germline fab and lc-kappa vhh

Catalano, C. , Kang, G. , Phillips, A.M. , Scapin, G.

Primary Citation of Related Structures: 11OQ


Proteins
Molecule Chains Sequence Length Organism Sequence
SARS-CoV-2 Omicron BA.1 spike protein A 182 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 CPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFEL
Omi32 germline heavy chain H 217 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTAPPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
LC-Kappa VHH K 120 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
Omi32 germline light chain L 216 Homo Sapiens , Lama Glama , Severe Acute Respiratory Syndrome Coronavirus 2 EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2026-03-06
Deposition Author(s): Catalano, C. , Kang, G. , Phillips, A.M. , Scapin, G.