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10OP

Cryo-em structure of sudan ebolavirus gp bound by three neutralizing antibodies 545s, 523s and 294s

PDB DOI: 10.2210/pdb10op/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Sudan Ebolavirus

Deposited: 2026-01-29
Deposition Author(s): Cheng, J. , Kwong, P.D. , Misasi, J. , Pierson, T.C. , Sullivan, N.J. , Zhao, B. , Zhou, T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.63 Å

Literature

Cryo-em structure of sudan ebolavirus gp bound by three neutralizing antibodies 545s, 523s and 294s

Cheng, J. , Kwong, P.D. , Misasi, J. , Pierson, T.C. , Sullivan, N.J. , Zhao, B. , Zhou, T.

Primary Citation of Related Structures: 10OP


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein 1 A 204 Homo Sapiens , Sudan Ebolavirus SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFK
Envelope glycoprotein 1 C 204 Homo Sapiens , Sudan Ebolavirus SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFK
Envelope glycoprotein 1 E 204 Homo Sapiens , Sudan Ebolavirus SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFK
Envelope glycoprotein 2 B 122 Homo Sapiens , Sudan Ebolavirus KCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTELRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDWTKNITDKINQIIHDFI
Envelope glycoprotein 2 D 122 Homo Sapiens , Sudan Ebolavirus KCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTELRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDWTKNITDKINQIIHDFI
Envelope glycoprotein 2 F 122 Homo Sapiens , Sudan Ebolavirus KCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTELRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDWTKNITDKINQIIHDFI
545S Heavy Chain G 121 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISRAGSYWSWIRQHPGKGLEWIGYISYSGSTYYNPSLESRVTMSLDTSKSQFSLKLSSVTAADTAVYYCAREDRSGFYGLDVWGQGTTVTVSS
545S Heavy Chain I 121 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISRAGSYWSWIRQHPGKGLEWIGYISYSGSTYYNPSLESRVTMSLDTSKSQFSLKLSSVTAADTAVYYCAREDRSGFYGLDVWGQGTTVTVSS
545S Heavy Chain K 121 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISRAGSYWSWIRQHPGKGLEWIGYISYSGSTYYNPSLESRVTMSLDTSKSQFSLKLSSVTAADTAVYYCAREDRSGFYGLDVWGQGTTVTVSS
545S Light Chain H 115 Homo Sapiens , Sudan Ebolavirus QSVLTQPSSLSASPGATASLTCTLRSGINVDTYRIYWYQQKPGSPPQYLLRYKSDSDKHQGSGVPSRFSGSKDASANAGILLISGLQSADEADYYCMIWHSGAWVFGGGTKLTVQ
545S Light Chain J 115 Homo Sapiens , Sudan Ebolavirus QSVLTQPSSLSASPGATASLTCTLRSGINVDTYRIYWYQQKPGSPPQYLLRYKSDSDKHQGSGVPSRFSGSKDASANAGILLISGLQSADEADYYCMIWHSGAWVFGGGTKLTVQ
545S Light Chain L 115 Homo Sapiens , Sudan Ebolavirus QSVLTQPSSLSASPGATASLTCTLRSGINVDTYRIYWYQQKPGSPPQYLLRYKSDSDKHQGSGVPSRFSGSKDASANAGILLISGLQSADEADYYCMIWHSGAWVFGGGTKLTVQ
523S Heavy Chain M 124 Homo Sapiens , Sudan Ebolavirus QVQLVQSGAELKKPGASVKVSCKASGYTFSDHYVHWVRQAPGQGLEWMGRINPNSGGTNYAQRFLGRVTMTRDASISTAYLDLSSLRSDDTAVYYCARSSSSWSGHYYYYMDVWGKGTTVTVSS
523S Heavy Chain O 124 Homo Sapiens , Sudan Ebolavirus QVQLVQSGAELKKPGASVKVSCKASGYTFSDHYVHWVRQAPGQGLEWMGRINPNSGGTNYAQRFLGRVTMTRDASISTAYLDLSSLRSDDTAVYYCARSSSSWSGHYYYYMDVWGKGTTVTVSS
523S Heavy Chain Q 124 Homo Sapiens , Sudan Ebolavirus QVQLVQSGAELKKPGASVKVSCKASGYTFSDHYVHWVRQAPGQGLEWMGRINPNSGGTNYAQRFLGRVTMTRDASISTAYLDLSSLRSDDTAVYYCARSSSSWSGHYYYYMDVWGKGTTVTVSS
523S Light Chain N 110 Homo Sapiens , Sudan Ebolavirus QSVLTQPPSVSAAPGQRVTISCSGSTSNIASNFVSWYQQLPGTAPKLLIYDNHKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKVTVL
523S Light Chain P 110 Homo Sapiens , Sudan Ebolavirus QSVLTQPPSVSAAPGQRVTISCSGSTSNIASNFVSWYQQLPGTAPKLLIYDNHKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKVTVL
523S Light Chain R 110 Homo Sapiens , Sudan Ebolavirus QSVLTQPPSVSAAPGQRVTISCSGSTSNIASNFVSWYQQLPGTAPKLLIYDNHKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKVTVL
294S Heavy Chain S 125 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYHWSWIRQHPGKGLEWIGNIYYNGRTYYNPSLKSRVTISVDTSENEFSLKLSSVTAADTAVYYCARDRRRPRIGHDYGMDVWGQGTKVIVSS
294S Heavy Chain U 125 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYHWSWIRQHPGKGLEWIGNIYYNGRTYYNPSLKSRVTISVDTSENEFSLKLSSVTAADTAVYYCARDRRRPRIGHDYGMDVWGQGTKVIVSS
294S Heavy Chain W 125 Homo Sapiens , Sudan Ebolavirus QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYHWSWIRQHPGKGLEWIGNIYYNGRTYYNPSLKSRVTISVDTSENEFSLKLSSVTAADTAVYYCARDRRRPRIGHDYGMDVWGQGTKVIVSS
294S Light Chain T 108 Homo Sapiens , Sudan Ebolavirus DIQMTQSPSSLSASVGDRVTISCRASQSISNFLNWYQQKPGQAPKLLIYTASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQIYNTGMYSFGQGTKLEIK
294S Light Chain V 108 Homo Sapiens , Sudan Ebolavirus DIQMTQSPSSLSASVGDRVTISCRASQSISNFLNWYQQKPGQAPKLLIYTASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQIYNTGMYSFGQGTKLEIK
294S Light Chain X 108 Homo Sapiens , Sudan Ebolavirus DIQMTQSPSSLSASVGDRVTISCRASQSISNFLNWYQQKPGQAPKLLIYTASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQIYNTGMYSFGQGTKLEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2026-01-29
Deposition Author(s): Cheng, J. , Kwong, P.D. , Misasi, J. , Pierson, T.C. , Sullivan, N.J. , Zhao, B. , Zhou, T.