Scaffolding protein functional sites using deep learning Deposition Author(s): Baker, D. , Bera, A.K. , Watson, J.
Date: 2022-07-24 Method: X-RAY DIFFRACTION Resolution: 2.46 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8DT0_A , 8DT0_B
Scaffolding protein functional sites using deep learning Deposition Author(s): Baker, D. , Bera, A.K. , Gerben, S.
Date: 2022-08-10 Method: X-RAY DIFFRACTION Resolution: 4.27 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8E1E_A , 8E1E_B , 8E1E_C
Design of diverse asymmetric pockets in de novo homo-oligomeric proteins Deposition Author(s): Baker, D. , Borst, A.J. , Gerben, S.
Date: 2022-08-19 Method: ELECTRON MICROSCOPY Resolution: 3.85 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8E55_A , 8E55_B , 8E55_C , 8E55_D
Computational design of potent and selective inhibitors of bak and bax Deposition Author(s): Baker, D. , Bera, A.K. , Berger, S.A.
Date: 2022-09-16 Method: X-RAY DIFFRACTION Resolution: 2.81 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8EJA_B , 8EJA_A
Precisely patterned nanofibers made from extendable protein multiplexes Deposition Author(s): Baker, D. , Bethel, N.P. , Bick, M.J. , Parmeggiani, F. , Sankaran, B.
Date: 2022-10-12 Method: X-RAY DIFFRACTION Resolution: 2.88 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8ERW_A , 8ERW_B
Top-down design of protein architectures with reinforcement learning Deposition Author(s): Baker, D. , Borst, A.J.
Date: 2022-11-11 Method: ELECTRON MICROSCOPY Resolution: 3.01 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8F4X_0 , 8F4X_1 , 8F4X_2 , 8F4X_3 , 8F4X_4 , 8F4X_5 , 8F4X_6 , 8F4X_7 , 8F4X_8 , 8F4X_9 , 8F4X_A , 8F4X_B , 8F4X_C , 8F4X_D , 8F4X_E , 8F4X_F , 8F4X_G , 8F4X_H , 8F4X_I , 8F4X_J , 8F4X_K , 8F4X_L , 8F4X_M , 8F4X_N , 8F4X_O , 8F4X_P , 8F4X_Q , 8F4X_R , 8F4X_S , 8F4X_T , 8F4X_U , 8F4X_V , 8F4X_W , 8F4X_X , 8F4X_Y , 8F4X_Z
Top-down design of protein architectures with reinforcement learning Deposition Author(s): Baker, D. , Borst, A.J.
Date: 2022-11-11 Method: ELECTRON MICROSCOPY Resolution: 2.93 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8F53_A , 8F53_F , 8F53_K , 8F53_U , 8F53_J1 , 8F53_OD , 8F53_TC , 8F53_BA , 8F53_B , 8F53_G , 8F53_L , 8F53_V , 8F53_Z , 8F53_ID , 8F53_NH , 8F53_SL , 8F53_XP , 8F53_YB , 8F53_C , 8F53_H , 8F53_M , 8F53_W , 8F53_CA , 8F53_HE , 8F53_MI , 8F53_RM , 8F53_WQ , 8F53_AE , 8F53_D , 8F53_I , 8F53_N , 8F53_X , 8F53_BB , 8F53_GF , 8F53_LJ , 8F53_QN , 8F53_VR , 8F53_ZT , 8F53_E , 8F53_J , 8F53_O , 8F53_Y , 8F53_DC , 8F53_FG , 8F53_KK , 8F53_PO , 8F53_US , 8F53_HU , 8F53_P , 8F53_GV , 8F53_Q , 8F53_FW , 8F53_R , 8F53_EX , 8F53_S , 8F53_DY , 8F53_T , 8F53_CZ , 8F53_0 , 8F53_2
Top-down design of protein architectures with reinforcement learning Deposition Author(s): Baker, D. , Borst, A.J.
Date: 2022-11-11 Method: ELECTRON MICROSCOPY Resolution: 2.5 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8F54_L , 8F54_O , 8F54_P , 8F54_A , 8F54_Q , 8F54_S , 8F54_R , 8F54_C , 8F54_D , 8F54_T , 8F54_E , 8F54_B , 8F54_I , 8F54_K , 8F54_U , 8F54_M , 8F54_G , 8F54_N , 8F54_V , 8F54_F , 8F54_J , 8F54_H , 8F54_W , 8F54_X , 8F54_Y , 8F54_Z , 8F54_0 , 8F54_1 , 8F54_2 , 8F54_3 , 8F54_4 , 8F54_5 , 8F54_7 , 8F54_6
Cryoem structure of designed modular protein oligomer c8-71 Deposition Author(s): Baker, D. , Bhabha, G. , Edman, N.I. , Ekiert, D. , Redler, R.L.
Date: 2022-11-17 Method: ELECTRON MICROSCOPY Resolution: 3.6 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8F6Q_A , 8F6Q_B , 8F6Q_C , 8F6Q_D , 8F6Q_E , 8F6Q_F , 8F6Q_G , 8F6Q_H
Cryoem structure of designed modular protein oligomer c6-79 Deposition Author(s): Baker, D. , Bhabha, G. , Edman, N.I. , Ekiert, D. , Redler, R.L.
Date: 2022-11-17 Method: ELECTRON MICROSCOPY Resolution: 4.0 Å Organism(s): Fremyella Diplosiphon Sequences Data: 8F6R_A , 8F6R_B , 8F6R_C , 8F6R_D , 8F6R_E , 8F6R_F