Joint x-ray/neutron structure of thermus thermophilus serine hydroxymethyltransferase (tthshmt) in internal aldimine state with l-ser bound in a pre-michalis complex Deposition Author(s): Drago, V.N. , Kovalevsky, A.
Date: 2023-05-12 Method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION Resolution: 2,2.3 Å Organism(s): Thermus Thermophilus Hb8 Sequences Data: 8SUI_A , 8SUI_B
Joint x-ray/neutron structure of thermus thermophilus serine hydroxymethyltransferase (tthshmt) in internal aldimine state Deposition Author(s): Drago, V.N. , Kovalevsky, A.
Date: 2023-05-12 Method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION Resolution: 2,2.3 Å Organism(s): Thermus Thermophilus Hb8 Sequences Data: 8SUJ_A , 8SUJ_B
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, a-site aminoacyl-trna analog acc-pmn, and p-site formyl-mai-tripeptidyl-trna analog acca-iamf at 2.65a resolution Deposition Author(s): Breuker, K. , Micura, R. , Polikanov, Y.S. , Syroegin, E.A. , Thaler, J.
Date: 2023-06-22 Method: X-RAY DIFFRACTION Resolution: 2.65 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8T8B_1A , 8T8B_2A , 8T8B_1O , 8T8B_2O , 8T8B_1P , 8T8B_2P , 8T8B_1Q , 8T8B_2Q , 8T8B_1R , 8T8B_2R , 8T8B_1S , 8T8B_2S , 8T8B_1T , 8T8B_2T , 8T8B_1U , 8T8B_2U , 8T8B_1V , 8T8B_2V , 8T8B_1W , 8T8B_2W , 8T8B_1X , 8T8B_2X , 8T8B_1B , 8T8B_2B , 8T8B_1Y , 8T8B_2Y , 8T8B_1Z , 8T8B_2Z , 8T8B_10 , 8T8B_20 , 8T8B_11 , 8T8B_21 , 8T8B_12 , 8T8B_22 , 8T8B_13 , 8T8B_23 , 8T8B_14 , 8T8B_24 , 8T8B_15 , 8T8B_25 , 8T8B_16 , 8T8B_26 , 8T8B_17 , 8T8B_27 , 8T8B_1D , 8T8B_2D , 8T8B_18 , 8T8B_28 , 8T8B_19 , 8T8B_29 , 8T8B_1C , 8T8B_2C , 8T8B_1E , 8T8B_2E , 8T8B_1F , 8T8B_2F , 8T8B_1G , 8T8B_2G , 8T8B_1H , 8T8B_2H , 8T8B_1I , 8T8B_2I , 8T8B_1J , 8T8B_2J , 8T8B_1K , 8T8B_2K , 8T8B_1L , 8T8B_2L , 8T8B_1M , 8T8B_2M , 8T8B_1N , 8T8B_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, a-site aminoacyl-trna analog acc-pmn, and p-site formyl-mfi-tripeptidyl-trna analog acca-ifmf at 2.60a resolution Deposition Author(s): Breuker, K. , Micura, R. , Polikanov, Y.S. , Syroegin, E.A. , Thaler, J.
Date: 2023-06-22 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8T8C_1A , 8T8C_2A , 8T8C_1O , 8T8C_2O , 8T8C_1P , 8T8C_2P , 8T8C_1Q , 8T8C_2Q , 8T8C_1R , 8T8C_2R , 8T8C_1S , 8T8C_2S , 8T8C_1T , 8T8C_2T , 8T8C_1U , 8T8C_2U , 8T8C_1V , 8T8C_2V , 8T8C_1W , 8T8C_2W , 8T8C_1X , 8T8C_2X , 8T8C_1B , 8T8C_2B , 8T8C_1Y , 8T8C_2Y , 8T8C_1Z , 8T8C_2Z , 8T8C_10 , 8T8C_20 , 8T8C_11 , 8T8C_21 , 8T8C_12 , 8T8C_22 , 8T8C_13 , 8T8C_23 , 8T8C_14 , 8T8C_24 , 8T8C_15 , 8T8C_25 , 8T8C_16 , 8T8C_26 , 8T8C_17 , 8T8C_27 , 8T8C_1D , 8T8C_2D , 8T8C_18 , 8T8C_28 , 8T8C_19 , 8T8C_29 , 8T8C_1C , 8T8C_2C , 8T8C_1E , 8T8C_2E , 8T8C_1F , 8T8C_2F , 8T8C_1G , 8T8C_2G , 8T8C_1H , 8T8C_2H , 8T8C_1I , 8T8C_2I , 8T8C_1J , 8T8C_2J , 8T8C_1K , 8T8C_2K , 8T8C_1L , 8T8C_2L , 8T8C_1M , 8T8C_2M , 8T8C_1N , 8T8C_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UD6_1A , 8UD6_2A , 8UD6_1O , 8UD6_2O , 8UD6_1P , 8UD6_2P , 8UD6_1Q , 8UD6_2Q , 8UD6_1R , 8UD6_2R , 8UD6_1S , 8UD6_2S , 8UD6_1T , 8UD6_2T , 8UD6_1U , 8UD6_2U , 8UD6_1V , 8UD6_2V , 8UD6_1W , 8UD6_2W , 8UD6_1X , 8UD6_2X , 8UD6_1B , 8UD6_2B , 8UD6_1Y , 8UD6_2Y , 8UD6_1Z , 8UD6_2Z , 8UD6_10 , 8UD6_20 , 8UD6_11 , 8UD6_21 , 8UD6_12 , 8UD6_22 , 8UD6_13 , 8UD6_23 , 8UD6_14 , 8UD6_24 , 8UD6_15 , 8UD6_25 , 8UD6_16 , 8UD6_26 , 8UD6_17 , 8UD6_27 , 8UD6_1D , 8UD6_2D , 8UD6_18 , 8UD6_28 , 8UD6_19 , 8UD6_29 , 8UD6_1C , 8UD6_2C , 8UD6_1E , 8UD6_2E , 8UD6_1F , 8UD6_2F , 8UD6_1G , 8UD6_2G , 8UD6_1H , 8UD6_2H , 8UD6_1I , 8UD6_2I , 8UD6_1J , 8UD6_2J , 8UD6_1K , 8UD6_2K , 8UD6_1L , 8UD6_2L , 8UD6_1M , 8UD6_2M , 8UD6_1N , 8UD6_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.55 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UD7_1A , 8UD7_2A , 8UD7_1O , 8UD7_2O , 8UD7_1P , 8UD7_2P , 8UD7_1Q , 8UD7_2Q , 8UD7_1R , 8UD7_2R , 8UD7_1S , 8UD7_2S , 8UD7_1T , 8UD7_2T , 8UD7_1U , 8UD7_2U , 8UD7_1V , 8UD7_2V , 8UD7_1W , 8UD7_2W , 8UD7_1X , 8UD7_2X , 8UD7_1B , 8UD7_2B , 8UD7_1Y , 8UD7_2Y , 8UD7_1Z , 8UD7_2Z , 8UD7_10 , 8UD7_20 , 8UD7_11 , 8UD7_21 , 8UD7_12 , 8UD7_22 , 8UD7_13 , 8UD7_23 , 8UD7_14 , 8UD7_24 , 8UD7_15 , 8UD7_25 , 8UD7_16 , 8UD7_26 , 8UD7_17 , 8UD7_27 , 8UD7_1D , 8UD7_2D , 8UD7_18 , 8UD7_28 , 8UD7_19 , 8UD7_29 , 8UD7_1C , 8UD7_2C , 8UD7_1E , 8UD7_2E , 8UD7_1F , 8UD7_2F , 8UD7_1G , 8UD7_2G , 8UD7_1H , 8UD7_2H , 8UD7_1I , 8UD7_2I , 8UD7_1J , 8UD7_2J , 8UD7_1K , 8UD7_2K , 8UD7_1L , 8UD7_2L , 8UD7_1M , 8UD7_2M , 8UD7_1N , 8UD7_2N
Crystal structure of the a2503-c2,c8-dimethylated thermus thermophilus 70s ribosome in complex with cresomycin, mrna, deacylated a-site trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.70a resolution Deposition Author(s): Aleksandrova, E.V. , Dittemore, G.A. , Liow, P. , Liu, R.Y. , Mitcheltree, M.J. , Myers, A.G. , Polikanov, Y.S. , Ramkissoon, A. , See, D.N.Y. , Svetlov, M.S. , Syroegin, E.A. , Testolin, G. , Tresco, B.I.C. , Wu, K.J.Y. , Yu, M.
Date: 2023-09-28 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UD8_1A , 8UD8_2A , 8UD8_1O , 8UD8_2O , 8UD8_1P , 8UD8_2P , 8UD8_1Q , 8UD8_2Q , 8UD8_1R , 8UD8_2R , 8UD8_1S , 8UD8_2S , 8UD8_1T , 8UD8_2T , 8UD8_1U , 8UD8_2U , 8UD8_1V , 8UD8_2V , 8UD8_1W , 8UD8_2W , 8UD8_1X , 8UD8_2X , 8UD8_1B , 8UD8_2B , 8UD8_1Y , 8UD8_2Y , 8UD8_1Z , 8UD8_2Z , 8UD8_10 , 8UD8_20 , 8UD8_11 , 8UD8_21 , 8UD8_12 , 8UD8_22 , 8UD8_13 , 8UD8_23 , 8UD8_14 , 8UD8_24 , 8UD8_15 , 8UD8_25 , 8UD8_16 , 8UD8_26 , 8UD8_17 , 8UD8_27 , 8UD8_1D , 8UD8_2D , 8UD8_18 , 8UD8_28 , 8UD8_19 , 8UD8_29 , 8UD8_1C , 8UD8_2C , 8UD8_1E , 8UD8_2E , 8UD8_1F , 8UD8_2F , 8UD8_1G , 8UD8_2G , 8UD8_1H , 8UD8_2H , 8UD8_1I , 8UD8_2I , 8UD8_1J , 8UD8_2J , 8UD8_1K , 8UD8_2K , 8UD8_1L , 8UD8_2L , 8UD8_1M , 8UD8_2M , 8UD8_1N , 8UD8_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with spectinomycin, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.60a resolution Deposition Author(s): Killam, B.Y. , Lee, R.E. , Phelps, G.A. , Polikanov, Y.S.
Date: 2023-11-03 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UVR_1A , 8UVR_2A , 8UVR_1O , 8UVR_2O , 8UVR_1P , 8UVR_2P , 8UVR_1Q , 8UVR_2Q , 8UVR_1R , 8UVR_2R , 8UVR_1S , 8UVR_2S , 8UVR_1T , 8UVR_2T , 8UVR_1U , 8UVR_2U , 8UVR_1V , 8UVR_2V , 8UVR_1W , 8UVR_2W , 8UVR_1X , 8UVR_2X , 8UVR_1B , 8UVR_2B , 8UVR_1Y , 8UVR_2Y , 8UVR_1Z , 8UVR_2Z , 8UVR_10 , 8UVR_20 , 8UVR_11 , 8UVR_21 , 8UVR_12 , 8UVR_22 , 8UVR_13 , 8UVR_23 , 8UVR_14 , 8UVR_24 , 8UVR_15 , 8UVR_25 , 8UVR_16 , 8UVR_26 , 8UVR_17 , 8UVR_27 , 8UVR_1D , 8UVR_2D , 8UVR_18 , 8UVR_28 , 8UVR_19 , 8UVR_29 , 8UVR_1C , 8UVR_2C , 8UVR_1E , 8UVR_2E , 8UVR_1F , 8UVR_2F , 8UVR_1G , 8UVR_2G , 8UVR_1H , 8UVR_2H , 8UVR_1I , 8UVR_2I , 8UVR_1J , 8UVR_2J , 8UVR_1K , 8UVR_2K , 8UVR_1L , 8UVR_2L , 8UVR_1M , 8UVR_2M , 8UVR_1N , 8UVR_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with spectinomycin derivative 2694, mrna, deacylated a- and e-site trnaphe, and deacylated p-site trnamet at 2.75a resolution Deposition Author(s): Killam, B.Y. , Lee, R.E. , Phelps, G.A. , Polikanov, Y.S.
Date: 2023-11-03 Method: X-RAY DIFFRACTION Resolution: 2.75 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8UVS_1A , 8UVS_2A , 8UVS_1O , 8UVS_2O , 8UVS_1P , 8UVS_2P , 8UVS_1Q , 8UVS_2Q , 8UVS_1R , 8UVS_2R , 8UVS_1S , 8UVS_2S , 8UVS_1T , 8UVS_2T , 8UVS_1U , 8UVS_2U , 8UVS_1V , 8UVS_2V , 8UVS_1W , 8UVS_2W , 8UVS_1X , 8UVS_2X , 8UVS_1B , 8UVS_2B , 8UVS_1Y , 8UVS_2Y , 8UVS_1Z , 8UVS_2Z , 8UVS_10 , 8UVS_20 , 8UVS_11 , 8UVS_21 , 8UVS_12 , 8UVS_22 , 8UVS_13 , 8UVS_23 , 8UVS_14 , 8UVS_24 , 8UVS_15 , 8UVS_25 , 8UVS_16 , 8UVS_26 , 8UVS_17 , 8UVS_27 , 8UVS_1D , 8UVS_2D , 8UVS_18 , 8UVS_28 , 8UVS_19 , 8UVS_29 , 8UVS_1C , 8UVS_2C , 8UVS_1E , 8UVS_2E , 8UVS_1F , 8UVS_2F , 8UVS_1G , 8UVS_2G , 8UVS_1H , 8UVS_2H , 8UVS_1I , 8UVS_2I , 8UVS_1J , 8UVS_2J , 8UVS_1K , 8UVS_2K , 8UVS_1L , 8UVS_2L , 8UVS_1M , 8UVS_2M , 8UVS_1N , 8UVS_2N
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with macrolone mcx-66, mrna, aminoacylated a-site phe-trnaphe, aminoacylated p-site fmet-trnamet, and deacylated e-site trnaphe at 2.40a resolution Deposition Author(s): Aleksandrova, E.V. , Alizadeh, F. , Klepacki, D. , Liang, J.-H. , Ma, C.-X. , Mankin, A.S. , Polikanov, Y.S. , Vazquez-Laslop, N.
Date: 2024-01-27 Method: X-RAY DIFFRACTION Resolution: 2.4 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8VTU_1A , 8VTU_2A , 8VTU_1O , 8VTU_2O , 8VTU_1P , 8VTU_2P , 8VTU_1Q , 8VTU_2Q , 8VTU_1R , 8VTU_2R , 8VTU_1S , 8VTU_2S , 8VTU_1T , 8VTU_2T , 8VTU_1U , 8VTU_2U , 8VTU_1V , 8VTU_2V , 8VTU_1W , 8VTU_2W , 8VTU_1X , 8VTU_2X , 8VTU_1B , 8VTU_2B , 8VTU_1Y , 8VTU_2Y , 8VTU_1Z , 8VTU_2Z , 8VTU_10 , 8VTU_20 , 8VTU_11 , 8VTU_21 , 8VTU_12 , 8VTU_22 , 8VTU_13 , 8VTU_23 , 8VTU_14 , 8VTU_24 , 8VTU_15 , 8VTU_25 , 8VTU_16 , 8VTU_26 , 8VTU_17 , 8VTU_27 , 8VTU_1D , 8VTU_2D , 8VTU_18 , 8VTU_28 , 8VTU_19 , 8VTU_29 , 8VTU_1C , 8VTU_2C , 8VTU_1E , 8VTU_2E , 8VTU_1F , 8VTU_2F , 8VTU_1G , 8VTU_2G , 8VTU_1H , 8VTU_2H , 8VTU_1I , 8VTU_2I , 8VTU_1J , 8VTU_2J , 8VTU_1K , 8VTU_2K , 8VTU_1L , 8VTU_2L , 8VTU_1M , 8VTU_2M , 8VTU_1N , 8VTU_2N