Crystal structure of the thermus thermophilus 70s ribosome in complex with mrna, deacylated p-site trnamet, and thermorubin at 2.70a resolution Deposition Author(s): Paranjpe, M.N. , Polikanov, Y.S.
Date: 2022-09-20 Method: X-RAY DIFFRACTION Resolution: 2.7 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8EKB_1A , 8EKB_2A , 8EKB_1O , 8EKB_2O , 8EKB_1P , 8EKB_2P , 8EKB_1Q , 8EKB_2Q , 8EKB_1R , 8EKB_2R , 8EKB_1S , 8EKB_2S , 8EKB_1T , 8EKB_2T , 8EKB_1U , 8EKB_2U , 8EKB_1V , 8EKB_2V , 8EKB_1W , 8EKB_2W , 8EKB_1X , 8EKB_2X , 8EKB_1B , 8EKB_2B , 8EKB_1Y , 8EKB_2Y , 8EKB_1Z , 8EKB_2Z , 8EKB_10 , 8EKB_20 , 8EKB_11 , 8EKB_21 , 8EKB_12 , 8EKB_22 , 8EKB_13 , 8EKB_23 , 8EKB_14 , 8EKB_24 , 8EKB_15 , 8EKB_25 , 8EKB_16 , 8EKB_26 , 8EKB_17 , 8EKB_27 , 8EKB_1D , 8EKB_2D , 8EKB_18 , 8EKB_28 , 8EKB_19 , 8EKB_29 , 8EKB_1C , 8EKB_2C , 8EKB_1E , 8EKB_2E , 8EKB_1F , 8EKB_2F , 8EKB_1G , 8EKB_2G , 8EKB_1H , 8EKB_2H , 8EKB_1I , 8EKB_2I , 8EKB_1J , 8EKB_2J , 8EKB_1K , 8EKB_2K , 8EKB_1L , 8EKB_2L , 8EKB_1M , 8EKB_2M , 8EKB_1N , 8EKB_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with amikacin, mrna, and a-, p-, and e-site trnas Deposition Author(s): Gagnon, M.G. , Seely, S.M.
Date: 2022-10-19 Method: X-RAY DIFFRACTION Resolution: 2.946 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8EV6_1A , 8EV6_2A , 8EV6_1O , 8EV6_2O , 8EV6_1P , 8EV6_2P , 8EV6_1Q , 8EV6_2Q , 8EV6_1R , 8EV6_2R , 8EV6_1S , 8EV6_2S , 8EV6_1T , 8EV6_2T , 8EV6_1U , 8EV6_2U , 8EV6_1V , 8EV6_2V , 8EV6_1W , 8EV6_2W , 8EV6_1X , 8EV6_2X , 8EV6_1B , 8EV6_2B , 8EV6_1Y , 8EV6_2Y , 8EV6_1Z , 8EV6_2Z , 8EV6_10 , 8EV6_20 , 8EV6_11 , 8EV6_21 , 8EV6_12 , 8EV6_22 , 8EV6_13 , 8EV6_23 , 8EV6_14 , 8EV6_24 , 8EV6_15 , 8EV6_25 , 8EV6_16 , 8EV6_26 , 8EV6_17 , 8EV6_27 , 8EV6_1D , 8EV6_2D , 8EV6_18 , 8EV6_28 , 8EV6_19 , 8EV6_29 , 8EV6_1C , 8EV6_2C , 8EV6_1E , 8EV6_2E , 8EV6_1F , 8EV6_2F , 8EV6_1G , 8EV6_2G , 8EV6_1H , 8EV6_2H , 8EV6_1I , 8EV6_2I , 8EV6_1J , 8EV6_2J , 8EV6_1K , 8EV6_2K , 8EV6_1L , 8EV6_2L , 8EV6_1M , 8EV6_2M , 8EV6_1N , 8EV6_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with kanamycin, mrna, and a-, p-, and e-site trnas Deposition Author(s): Gagnon, M.G. , Seely, S.M.
Date: 2022-10-19 Method: X-RAY DIFFRACTION Resolution: 2.89 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8EV7_1A , 8EV7_2A , 8EV7_1O , 8EV7_2O , 8EV7_1P , 8EV7_2P , 8EV7_1Q , 8EV7_2Q , 8EV7_1R , 8EV7_2R , 8EV7_1S , 8EV7_2S , 8EV7_1T , 8EV7_2T , 8EV7_1U , 8EV7_2U , 8EV7_1V , 8EV7_2V , 8EV7_1W , 8EV7_2W , 8EV7_1X , 8EV7_2X , 8EV7_1B , 8EV7_2B , 8EV7_1Y , 8EV7_2Y , 8EV7_1Z , 8EV7_2Z , 8EV7_10 , 8EV7_20 , 8EV7_11 , 8EV7_21 , 8EV7_12 , 8EV7_22 , 8EV7_13 , 8EV7_23 , 8EV7_14 , 8EV7_24 , 8EV7_15 , 8EV7_25 , 8EV7_16 , 8EV7_26 , 8EV7_17 , 8EV7_27 , 8EV7_1D , 8EV7_2D , 8EV7_18 , 8EV7_28 , 8EV7_19 , 8EV7_29 , 8EV7_1C , 8EV7_2C , 8EV7_1E , 8EV7_2E , 8EV7_1F , 8EV7_2F , 8EV7_1G , 8EV7_2G , 8EV7_1H , 8EV7_2H , 8EV7_1I , 8EV7_2I , 8EV7_1J , 8EV7_2J , 8EV7_1K , 8EV7_2K , 8EV7_1L , 8EV7_2L , 8EV7_1M , 8EV7_2M , 8EV7_1N , 8EV7_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and erythromycin at 2.50a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8FC1_1A , 8FC1_2A , 8FC1_1O , 8FC1_2O , 8FC1_1P , 8FC1_2P , 8FC1_1Q , 8FC1_2Q , 8FC1_1R , 8FC1_2R , 8FC1_1S , 8FC1_2S , 8FC1_1T , 8FC1_2T , 8FC1_1U , 8FC1_2U , 8FC1_1V , 8FC1_2V , 8FC1_1W , 8FC1_2W , 8FC1_1X , 8FC1_2X , 8FC1_1B , 8FC1_2B , 8FC1_1Y , 8FC1_2Y , 8FC1_1Z , 8FC1_2Z , 8FC1_10 , 8FC1_20 , 8FC1_11 , 8FC1_21 , 8FC1_12 , 8FC1_22 , 8FC1_13 , 8FC1_23 , 8FC1_14 , 8FC1_24 , 8FC1_15 , 8FC1_25 , 8FC1_16 , 8FC1_26 , 8FC1_17 , 8FC1_27 , 8FC1_1D , 8FC1_2D , 8FC1_18 , 8FC1_28 , 8FC1_19 , 8FC1_29 , 8FC1_1C , 8FC1_2C , 8FC1_1E , 8FC1_2E , 8FC1_1F , 8FC1_2F , 8FC1_1G , 8FC1_2G , 8FC1_1H , 8FC1_2H , 8FC1_1I , 8FC1_2I , 8FC1_1J , 8FC1_2J , 8FC1_1K , 8FC1_2K , 8FC1_1L , 8FC1_2L , 8FC1_1M , 8FC1_2M , 8FC1_1N , 8FC1_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and azithromycin at 2.50a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8FC2_1A , 8FC2_2A , 8FC2_1O , 8FC2_2O , 8FC2_1P , 8FC2_2P , 8FC2_1Q , 8FC2_2Q , 8FC2_1R , 8FC2_2R , 8FC2_1S , 8FC2_2S , 8FC2_1T , 8FC2_2T , 8FC2_1U , 8FC2_2U , 8FC2_1V , 8FC2_2V , 8FC2_1W , 8FC2_2W , 8FC2_1X , 8FC2_2X , 8FC2_1B , 8FC2_2B , 8FC2_1Y , 8FC2_2Y , 8FC2_1Z , 8FC2_2Z , 8FC2_10 , 8FC2_20 , 8FC2_11 , 8FC2_21 , 8FC2_12 , 8FC2_22 , 8FC2_13 , 8FC2_23 , 8FC2_14 , 8FC2_24 , 8FC2_15 , 8FC2_25 , 8FC2_16 , 8FC2_26 , 8FC2_17 , 8FC2_27 , 8FC2_1D , 8FC2_2D , 8FC2_18 , 8FC2_28 , 8FC2_19 , 8FC2_29 , 8FC2_1C , 8FC2_2C , 8FC2_1E , 8FC2_2E , 8FC2_1F , 8FC2_2F , 8FC2_1G , 8FC2_2G , 8FC2_1H , 8FC2_2H , 8FC2_1I , 8FC2_2I , 8FC2_1J , 8FC2_2J , 8FC2_1K , 8FC2_2K , 8FC2_1L , 8FC2_2L , 8FC2_1M , 8FC2_2M , 8FC2_1N , 8FC2_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and telithromycin at 2.60a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8FC3_1A , 8FC3_2A , 8FC3_1O , 8FC3_2O , 8FC3_1P , 8FC3_2P , 8FC3_1Q , 8FC3_2Q , 8FC3_1R , 8FC3_2R , 8FC3_1S , 8FC3_2S , 8FC3_1T , 8FC3_2T , 8FC3_1U , 8FC3_2U , 8FC3_1V , 8FC3_2V , 8FC3_1W , 8FC3_2W , 8FC3_1X , 8FC3_2X , 8FC3_1B , 8FC3_2B , 8FC3_1Y , 8FC3_2Y , 8FC3_1Z , 8FC3_2Z , 8FC3_10 , 8FC3_20 , 8FC3_11 , 8FC3_21 , 8FC3_12 , 8FC3_22 , 8FC3_13 , 8FC3_23 , 8FC3_14 , 8FC3_24 , 8FC3_15 , 8FC3_25 , 8FC3_16 , 8FC3_26 , 8FC3_17 , 8FC3_27 , 8FC3_1D , 8FC3_2D , 8FC3_18 , 8FC3_28 , 8FC3_19 , 8FC3_29 , 8FC3_1C , 8FC3_2C , 8FC3_1E , 8FC3_2E , 8FC3_1F , 8FC3_2F , 8FC3_1G , 8FC3_2G , 8FC3_1H , 8FC3_2H , 8FC3_1I , 8FC3_2I , 8FC3_1J , 8FC3_2J , 8FC3_1K , 8FC3_2K , 8FC3_1L , 8FC3_2L , 8FC3_1M , 8FC3_2M , 8FC3_1N , 8FC3_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and erythromycin at 2.45a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.45 Å Organism(s): Escherichia Coli K-12 , Thermus Thermophilus Hb8 Sequences Data: 8FC4_1A , 8FC4_2A , 8FC4_1O , 8FC4_2O , 8FC4_1P , 8FC4_2P , 8FC4_1Q , 8FC4_2Q , 8FC4_1R , 8FC4_2R , 8FC4_1S , 8FC4_2S , 8FC4_1T , 8FC4_2T , 8FC4_1U , 8FC4_2U , 8FC4_1V , 8FC4_2V , 8FC4_1W , 8FC4_2W , 8FC4_1X , 8FC4_2X , 8FC4_1B , 8FC4_2B , 8FC4_1Y , 8FC4_2Y , 8FC4_1Z , 8FC4_2Z , 8FC4_10 , 8FC4_20 , 8FC4_11 , 8FC4_21 , 8FC4_12 , 8FC4_22 , 8FC4_13 , 8FC4_23 , 8FC4_14 , 8FC4_24 , 8FC4_15 , 8FC4_25 , 8FC4_16 , 8FC4_26 , 8FC4_17 , 8FC4_27 , 8FC4_1D , 8FC4_2D , 8FC4_18 , 8FC4_28 , 8FC4_19 , 8FC4_29 , 8FC4_1C , 8FC4_2C , 8FC4_1E , 8FC4_2E , 8FC4_1F , 8FC4_2F , 8FC4_1G , 8FC4_2G , 8FC4_1H , 8FC4_2H , 8FC4_1I , 8FC4_2I , 8FC4_1J , 8FC4_2J , 8FC4_1K , 8FC4_2K , 8FC4_1L , 8FC4_2L , 8FC4_1M , 8FC4_2M , 8FC4_1N , 8FC4_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and azithromycin at 2.65a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.65 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 Sequences Data: 8FC5_1A , 8FC5_2A , 8FC5_1O , 8FC5_2O , 8FC5_1P , 8FC5_2P , 8FC5_1Q , 8FC5_2Q , 8FC5_1R , 8FC5_2R , 8FC5_1S , 8FC5_2S , 8FC5_1T , 8FC5_2T , 8FC5_1U , 8FC5_2U , 8FC5_1V , 8FC5_2V , 8FC5_1W , 8FC5_2W , 8FC5_1X , 8FC5_2X , 8FC5_1B , 8FC5_2B , 8FC5_1Y , 8FC5_2Y , 8FC5_1Z , 8FC5_2Z , 8FC5_10 , 8FC5_20 , 8FC5_11 , 8FC5_21 , 8FC5_12 , 8FC5_22 , 8FC5_13 , 8FC5_23 , 8FC5_14 , 8FC5_24 , 8FC5_15 , 8FC5_25 , 8FC5_16 , 8FC5_26 , 8FC5_17 , 8FC5_27 , 8FC5_1D , 8FC5_2D , 8FC5_18 , 8FC5_28 , 8FC5_19 , 8FC5_29 , 8FC5_1C , 8FC5_2C , 8FC5_1E , 8FC5_2E , 8FC5_1F , 8FC5_2F , 8FC5_1G , 8FC5_2G , 8FC5_1H , 8FC5_2H , 8FC5_1I , 8FC5_2I , 8FC5_1J , 8FC5_2J , 8FC5_1K , 8FC5_2K , 8FC5_1L , 8FC5_2L , 8FC5_1M , 8FC5_2M , 8FC5_1N , 8FC5_2N
Crystal structure of the a2058-n6-dimethylated thermus thermophilus 70s ribosome in complex with protein y, hygromycin a, and telithromycin at 2.35a resolution Deposition Author(s): Chen, C.-W. , Polikanov, Y.S. , Svetlov, M.S. , Syroegin, E.A.
Date: 2022-12-01 Method: X-RAY DIFFRACTION Resolution: 2.35 Å Organism(s): Escherichia Coli , Thermus Thermophilus Hb8 Sequences Data: 8FC6_1A , 8FC6_2A , 8FC6_1O , 8FC6_2O , 8FC6_1P , 8FC6_2P , 8FC6_1Q , 8FC6_2Q , 8FC6_1R , 8FC6_2R , 8FC6_1S , 8FC6_2S , 8FC6_1T , 8FC6_2T , 8FC6_1U , 8FC6_2U , 8FC6_1V , 8FC6_2V , 8FC6_1W , 8FC6_2W , 8FC6_1X , 8FC6_2X , 8FC6_1B , 8FC6_2B , 8FC6_1Y , 8FC6_2Y , 8FC6_1Z , 8FC6_2Z , 8FC6_10 , 8FC6_20 , 8FC6_11 , 8FC6_21 , 8FC6_12 , 8FC6_22 , 8FC6_13 , 8FC6_23 , 8FC6_14 , 8FC6_24 , 8FC6_15 , 8FC6_25 , 8FC6_16 , 8FC6_26 , 8FC6_17 , 8FC6_27 , 8FC6_1D , 8FC6_2D , 8FC6_18 , 8FC6_28 , 8FC6_19 , 8FC6_29 , 8FC6_1C , 8FC6_2C , 8FC6_1E , 8FC6_2E , 8FC6_1F , 8FC6_2F , 8FC6_1G , 8FC6_2G , 8FC6_1H , 8FC6_2H , 8FC6_1I , 8FC6_2I , 8FC6_1J , 8FC6_2J , 8FC6_1K , 8FC6_2K , 8FC6_1L , 8FC6_2L , 8FC6_1M , 8FC6_2M , 8FC6_1N , 8FC6_2N
Crystal structure of trna^lys(suu) bound to uaa codon in the ribosomal p site Deposition Author(s): Dunham, C.M. , Fagan, C.E. , Hoffer, E.D. , Maehigashi, T. , Nguyen, H.A.
Date: 2023-01-02 Method: X-RAY DIFFRACTION Resolution: 3.58 Å Organism(s): Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 8FOM_QA , 8FOM_XA , 8FOM_QJ , 8FOM_XJ , 8FOM_QK , 8FOM_XK , 8FOM_QL , 8FOM_XL , 8FOM_QM , 8FOM_XM , 8FOM_QN , 8FOM_XN , 8FOM_QO , 8FOM_XO , 8FOM_QP , 8FOM_XP , 8FOM_QQ , 8FOM_XQ , 8FOM_QR , 8FOM_XR , 8FOM_QS , 8FOM_XS , 8FOM_QB , 8FOM_XB , 8FOM_QT , 8FOM_XT , 8FOM_QU , 8FOM_XU , 8FOM_QV , 8FOM_XV , 8FOM_QX , 8FOM_XX , 8FOM_R0 , 8FOM_Y0 , 8FOM_R1 , 8FOM_Y1 , 8FOM_R2 , 8FOM_Y2 , 8FOM_R3 , 8FOM_Y3 , 8FOM_R4 , 8FOM_Y4 , 8FOM_R5 , 8FOM_Y5 , 8FOM_QC , 8FOM_XC , 8FOM_R6 , 8FOM_Y6 , 8FOM_R7 , 8FOM_Y7 , 8FOM_R8 , 8FOM_Y8 , 8FOM_R9 , 8FOM_Y9 , 8FOM_RA , 8FOM_YA , 8FOM_RB , 8FOM_YB , 8FOM_RD , 8FOM_YD , 8FOM_RE , 8FOM_YE , 8FOM_RF , 8FOM_YF , 8FOM_RG , 8FOM_YG , 8FOM_QD , 8FOM_XD , 8FOM_RH , 8FOM_YH , 8FOM_RI , 8FOM_YI , 8FOM_RN , 8FOM_YN , 8FOM_RO , 8FOM_YO , 8FOM_RP , 8FOM_YP , 8FOM_RQ , 8FOM_YQ , 8FOM_RR , 8FOM_YR , 8FOM_RS , 8FOM_YS , 8FOM_RT , 8FOM_YT , 8FOM_RU , 8FOM_YU , 8FOM_QE , 8FOM_XE , 8FOM_RV , 8FOM_YV , 8FOM_RW , 8FOM_YW , 8FOM_RX , 8FOM_YX , 8FOM_RY , 8FOM_YY , 8FOM_RZ , 8FOM_YZ , 8FOM_XY , 8FOM_Z6 , 8FOM_Z8 , 8FOM_QF , 8FOM_XF , 8FOM_QG , 8FOM_XG , 8FOM_QH , 8FOM_XH , 8FOM_QI , 8FOM_XI