Top-down design of protein architectures with reinforcement learning Deposition Author(s): Baker, D. , Borst, A.J.
Date: 2022-11-11 Method: ELECTRON MICROSCOPY Resolution: 2.93 Å Organism(s): Synthetic Construct Sequences Data: 8F53_A , 8F53_F , 8F53_K , 8F53_U , 8F53_J1 , 8F53_OD , 8F53_TC , 8F53_BA , 8F53_B , 8F53_G , 8F53_L , 8F53_V , 8F53_Z , 8F53_ID , 8F53_NH , 8F53_SL , 8F53_XP , 8F53_YB , 8F53_C , 8F53_H , 8F53_M , 8F53_W , 8F53_CA , 8F53_HE , 8F53_MI , 8F53_RM , 8F53_WQ , 8F53_AE , 8F53_D , 8F53_I , 8F53_N , 8F53_X , 8F53_BB , 8F53_GF , 8F53_LJ , 8F53_QN , 8F53_VR , 8F53_ZT , 8F53_E , 8F53_J , 8F53_O , 8F53_Y , 8F53_DC , 8F53_FG , 8F53_KK , 8F53_PO , 8F53_US , 8F53_HU , 8F53_P , 8F53_GV , 8F53_Q , 8F53_FW , 8F53_R , 8F53_EX , 8F53_S , 8F53_DY , 8F53_T , 8F53_CZ , 8F53_0 , 8F53_2
Top-down design of protein architectures with reinforcement learning Deposition Author(s): Baker, D. , Borst, A.J.
Date: 2022-11-11 Method: ELECTRON MICROSCOPY Resolution: 2.5 Å Organism(s): Synthetic Construct Sequences Data: 8F54_L , 8F54_O , 8F54_P , 8F54_A , 8F54_Q , 8F54_S , 8F54_R , 8F54_C , 8F54_D , 8F54_T , 8F54_E , 8F54_B , 8F54_I , 8F54_K , 8F54_U , 8F54_M , 8F54_G , 8F54_N , 8F54_V , 8F54_F , 8F54_J , 8F54_H , 8F54_W , 8F54_X , 8F54_Y , 8F54_Z , 8F54_0 , 8F54_1 , 8F54_2 , 8F54_3 , 8F54_4 , 8F54_5 , 8F54_7 , 8F54_6
Fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock Deposition Author(s): Baker, D. , Borst, A.J. , Skotheim, R.
Date: 2023-01-20 Method: ELECTRON MICROSCOPY Resolution: 3.67 Å Organism(s): Synthetic Construct Sequences Data: 8FWD_0 , 8FWD_2 , 8FWD_4 , 8FWD_6 , 8FWD_8 , 8FWD_B , 8FWD_D , 8FWD_F , 8FWD_H , 8FWD_J , 8FWD_L , 8FWD_N , 8FWD_P , 8FWD_R , 8FWD_T , 8FWD_V , 8FWD_X , 8FWD_Z , 8FWD_1 , 8FWD_3 , 8FWD_5 , 8FWD_7 , 8FWD_9 , 8FWD_A , 8FWD_C , 8FWD_E , 8FWD_G , 8FWD_I , 8FWD_K , 8FWD_M , 8FWD_O , 8FWD_Q , 8FWD_S , 8FWD_U , 8FWD_W , 8FWD_Y
C3hr3_9r_shift4: extendable repeat protein fiber Deposition Author(s): Bethel, N.P. , Borst, A.J.
Date: 2023-02-17 Method: ELECTRON MICROSCOPY Resolution: 3.92 Å Organism(s): Synthetic Construct Sequences Data: 8G8I_A , 8G8I_B , 8G8I_C , 8G8I_D , 8G8I_E
C4hr1_4r: extendable repeat protein tetramer Deposition Author(s): Bethel, N.P. , Borst, A.J.
Date: 2023-02-22 Method: ELECTRON MICROSCOPY Resolution: 3.71 Å Organism(s): Synthetic Construct Sequences Data: 8GA9_A , 8GA9_C , 8GA9_E , 8GA9_G
C6hr1_4r: extendable repeat protein hexamer Deposition Author(s): Baker, D. , Bethel, N.P. , Borst, A.J.
Date: 2023-02-22 Method: ELECTRON MICROSCOPY Resolution: 4.24 Å Organism(s): Synthetic Construct Sequences Data: 8GAA_A , 8GAA_C , 8GAA_E , 8GAA_G , 8GAA_I , 8GAA_K
C5hr2_4r: extendable repeat protein pentamer Deposition Author(s): Bethel, N.P. , Borst, A.J.
Date: 2023-02-23 Method: ELECTRON MICROSCOPY Resolution: 3.73 Å Organism(s): Synthetic Construct Sequences Data: 8GAQ_A , 8GAQ_C , 8GAQ_E , 8GAQ_G , 8GAQ_I
Cryo-em structure of designed influenza ha binder, ha_20, bound to influenza ha (strain: iowa43) Deposition Author(s): Bennett, N.R. , Borst, A.J.
Date: 2023-04-18 Method: ELECTRON MICROSCOPY Resolution: 2.93 Å Organism(s): Influenza A Virus , Synthetic Construct Sequences Data: 8SK7_A , 8SK7_B , 8SK7_C , 8SK7_G , 8SK7_H , 8SK7_I , 8SK7_X , 8SK7_Y , 8SK7_Z
Cryoem structure of a computationally designed t3 tetrahedral nanocage Deposition Author(s): Borst, A.J. , Weidle, C.
Date: 2023-07-26 Method: ELECTRON MICROSCOPY Resolution: 4.05 Å Organism(s): Synthetic Construct Sequences Data: 8TL7_A , 8TL7_B , 8TL7_C , 8TL7_I , 8TL7_R , 8TL7_S , 8TL7_T , 8TL7_U , 8TL7_V , 8TL7_X , 8TL7_Y , 8TL7_Z
Computational designed nanocage o43_129_+4 Deposition Author(s): Borst, A.J. , Carr, K.D. , Weidle, C.
Date: 2023-11-27 Method: ELECTRON MICROSCOPY Resolution: 6.4 Å Organism(s): Synthetic Construct Sequences Data: 8V3B_A , 8V3B_B , 8V3B_C , 8V3B_D , 8V3B_E , 8V3B_F , 8V3B_G , 8V3B_H , 8V3B_I , 8V3B_J , 8V3B_K , 8V3B_L , 8V3B_M , 8V3B_N , 8V3B_O , 8V3B_P , 8V3B_Q , 8V3B_R , 8V3B_S , 8V3B_T , 8V3B_U , 8V3B_V , 8V3B_W , 8V3B_X