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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9YF8

N4 full virion portal

PDB DOI: 10.2210/pdb9yf8/pdb

Classification: VIRAL PROTEIN
Organism(s): Escherichia Phage N4

Deposited: 2025-09-25
Deposition Author(s): Bellis, N.F. , Cingolani, G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

9yf8
Literature

N4 full virion portal

Bellis, N.F. , Cingolani, G.

Primary Citation of Related Structures: 9YF8


Proteins
Molecule Chains Sequence Length Organism Sequence
Probable portal protein PA 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PB 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PC 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PD 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PE 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PF 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PG 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PH 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PI 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PJ 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PK 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Probable portal protein PL 763 Escherichia Phage N4 MEQNTDSMVPLPDPSQATKLTSWKNELSLQALKADLDAAKPSHTAMMIKVKEWNDLMRIEGKAKPPKVKGRSQVQPKLVRRQAEWRYSALTEPFLGSNKLFKVTPVTWEDVQGARQNELVLNYQFRTKLNRVSFIDNYVRSVVDDGTGIVRVGWNREIRKEKQEVPVFSLFPIQTQEQADALQQALQLRTDNPRGYEENVDEAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKAMFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVAYEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDAELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQMIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESYGDVAAGIRGVLDAASKREMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIKREDLKGNFDLEVDISTAEVDNQKSQDLGFMLQTIGPNVDQQITLNILAEIADLKRMPKLAHDLRTWQPQPDPVQEQLKQLAVEKAQLENEELRSKIRLNDAQAQKAMAERDNKNLDYLEQESGTKHARDLEKMKAQSQGNQQLEITKALTKPRKEGELPPNLSAAIGYNALTNGEDTGIQSVSERDIAAEANPAYSLGSSQFDPTRDPALNPGIRLGN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-09-25
Deposition Author(s): Bellis, N.F. , Cingolani, G.