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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9RA2

Rna-free stacked-ring (r9) virus-like particle composed of jgmv coat protein

PDB DOI: 10.2210/pdb9ra2/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Johnsongrass Mosaic Virus

Deposited: 2025-05-20
Deposition Author(s): Kezar, A. , Koritnik, N. , Podobnik, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.51 Å

Literature

Rna-free stacked-ring (r9) virus-like particle composed of jgmv coat protein

Kezar, A. , Koritnik, N. , Podobnik, M.

Primary Citation of Related Structures: 9RA2


Proteins
Molecule Chains Sequence Length Organism Sequence
Genome polyprotein AA 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AB 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AC 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AD 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AE 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AF 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AG 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AH 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AI 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AJ 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AK 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AL 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AM 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AN 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AO 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AP 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AQ 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AR 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AS 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AT 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AU 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AV 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AW 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AX 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AY 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein AZ 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Genome polyprotein BA 303 Johnsongrass Mosaic Virus SGNEDAGKQKSATPAANQTASGDGKPVQTTATADNKPSSDNTSNAQGTSQTKGGGESGGTNATATKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNARATHTQFQFWYNRVKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMVDGNNQSEFPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFDFYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHSYRGAKI
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-05-20
Deposition Author(s): Kezar, A. , Koritnik, N. , Podobnik, M.