Cryo-em structure of cr12042 fab in complex with influenza virus neuraminidase from a/california/07/2009 (h1n1)
PDB DOI: 10.2210/pdb9o4n/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1))
Deposited: 2025-04-08 Deposition Author(s): Jo, G. , Ward, A.B.
Cryo-em structure of cr12042 fab in complex with influenza virus neuraminidase from a/california/07/2009 (h1n1)
Primary Citation of Related Structures: 9O4N
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Neuraminidase | A | 478 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGVKLAGNSSLCPVSGWAPLSKDNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSVPIGSVPSPYNARFESIAWSASACHDGINWLTIGITGPDNGAVAILKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQDIVGINEWSGYSGSFVMHPELTGLDCIVPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK |
| Neuraminidase | B | 478 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGVKLAGNSSLCPVSGWAPLSKDNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSVPIGSVPSPYNARFESIAWSASACHDGINWLTIGITGPDNGAVAILKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQDIVGINEWSGYSGSFVMHPELTGLDCIVPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK |
| Neuraminidase | C | 478 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGVKLAGNSSLCPVSGWAPLSKDNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSVPIGSVPSPYNARFESIAWSASACHDGINWLTIGITGPDNGAVAILKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQDIVGINEWSGYSGSFVMHPELTGLDCIVPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK |
| Neuraminidase | D | 478 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGVKLAGNSSLCPVSGWAPLSKDNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSVPIGSVPSPYNARFESIAWSASACHDGINWLTIGITGPDNGAVAILKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQDIVGINEWSGYSGSFVMHPELTGLDCIVPCFWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK |
| CR12042 heavy chain | H | 125 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EVQLVESGAEVRKPGSSVKVSCTASGDTFSSYTITWVRQAPGQGLEWMGEIIPIFGTANYAQKFQGRVTLTADESTTTAYMDLSSLRSEDTAVYYCARGPDNHSDRYFYYGMDVWGQGTTVTVSS |
| CR12042 heavy chain | E | 125 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EVQLVESGAEVRKPGSSVKVSCTASGDTFSSYTITWVRQAPGQGLEWMGEIIPIFGTANYAQKFQGRVTLTADESTTTAYMDLSSLRSEDTAVYYCARGPDNHSDRYFYYGMDVWGQGTTVTVSS |
| CR12042 heavy chain | F | 125 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EVQLVESGAEVRKPGSSVKVSCTASGDTFSSYTITWVRQAPGQGLEWMGEIIPIFGTANYAQKFQGRVTLTADESTTTAYMDLSSLRSEDTAVYYCARGPDNHSDRYFYYGMDVWGQGTTVTVSS |
| CR12042 heavy chain | G | 125 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EVQLVESGAEVRKPGSSVKVSCTASGDTFSSYTITWVRQAPGQGLEWMGEIIPIFGTANYAQKFQGRVTLTADESTTTAYMDLSSLRSEDTAVYYCARGPDNHSDRYFYYGMDVWGQGTTVTVSS |
| CR12042 light chain | L | 112 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EIVLTQSPLSLPVTPGEPASISCRSSQSLLHSTGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVDIK |
| CR12042 light chain | I | 112 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EIVLTQSPLSLPVTPGEPASISCRSSQSLLHSTGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVDIK |
| CR12042 light chain | J | 112 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EIVLTQSPLSLPVTPGEPASISCRSSQSLLHSTGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVDIK |
| CR12042 light chain | K | 112 | Homo Sapiens , Influenza A Virus (A/California/07/2009(H1N1)) | EIVLTQSPLSLPVTPGEPASISCRSSQSLLHSTGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVDIK |
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-04-08 Deposition Author(s): Jo, G. , Ward, A.B.