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FASTA Sequence PDB Format mmCIF Format
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9NQZ

Cryo-em structure of broad betacoronavirus binding antibody 1871 in complex with oc43 s2 subunit

PDB DOI: 10.2210/pdb9nqz/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Coronavirus Oc43

Deposited: 2025-03-13
Deposition Author(s): Jackman, M.J. , Julien, J.P. , Muthuraman, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.6 Å

Literature

Cryo-em structure of broad betacoronavirus binding antibody 1871 in complex with oc43 s2 subunit

Jackman, M.J. , Julien, J.P. , Muthuraman, K.

Primary Citation of Related Structures: 9NQZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 585 Homo Sapiens , Human Coronavirus Oc43 AITTGYRFTNFEPFTVNSVNDSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKLQLVEYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSECSKASSRSAIEDLLFDKVKLSDVGFVEAYNNCTGGAEIRDLICVQSYKGIKVLPPLLSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIANAFNNALHAIQQGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFNYVPTKYVTAKVSPGLCIAGNRGIAPKSGYFVNVNNTWMYTGSGYYYPEPITENNVVVMSTCAVNYTKAPYVMLNTSIPNLPDFKEELDQWFKNQTSVAPDLSLDYINVTFLDLQVEMNRLQEAIKVLNHSYINKDIGTYEYGSENLYFQSGSGGGGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHH
Spike glycoprotein B 585 Homo Sapiens , Human Coronavirus Oc43 AITTGYRFTNFEPFTVNSVNDSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKLQLVEYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSECSKASSRSAIEDLLFDKVKLSDVGFVEAYNNCTGGAEIRDLICVQSYKGIKVLPPLLSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIANAFNNALHAIQQGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFNYVPTKYVTAKVSPGLCIAGNRGIAPKSGYFVNVNNTWMYTGSGYYYPEPITENNVVVMSTCAVNYTKAPYVMLNTSIPNLPDFKEELDQWFKNQTSVAPDLSLDYINVTFLDLQVEMNRLQEAIKVLNHSYINKDIGTYEYGSENLYFQSGSGGGGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHH
Spike glycoprotein C 585 Homo Sapiens , Human Coronavirus Oc43 AITTGYRFTNFEPFTVNSVNDSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKLQLVEYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCLGSECSKASSRSAIEDLLFDKVKLSDVGFVEAYNNCTGGAEIRDLICVQSYKGIKVLPPLLSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIANAFNNALHAIQQGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFNYVPTKYVTAKVSPGLCIAGNRGIAPKSGYFVNVNNTWMYTGSGYYYPEPITENNVVVMSTCAVNYTKAPYVMLNTSIPNLPDFKEELDQWFKNQTSVAPDLSLDYINVTFLDLQVEMNRLQEAIKVLNHSYINKDIGTYEYGSENLYFQSGSGGGGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHH
1871 Fab light chain D 109 Homo Sapiens , Human Coronavirus Oc43 EIVMTQSPATLSVSPGERVTLSCRASQSVRSRLAWFQQKPGQAPRLLIYDASIRATGIPARFSGSGSGTEFTLIISSLQSEDFAVYYCQQYDNWPPAYTFGQGTKLEIK
1871 Fab light chain F 109 Homo Sapiens , Human Coronavirus Oc43 EIVMTQSPATLSVSPGERVTLSCRASQSVRSRLAWFQQKPGQAPRLLIYDASIRATGIPARFSGSGSGTEFTLIISSLQSEDFAVYYCQQYDNWPPAYTFGQGTKLEIK
1871 Fab light chain L 109 Homo Sapiens , Human Coronavirus Oc43 EIVMTQSPATLSVSPGERVTLSCRASQSVRSRLAWFQQKPGQAPRLLIYDASIRATGIPARFSGSGSGTEFTLIISSLQSEDFAVYYCQQYDNWPPAYTFGQGTKLEIK
1871 Fab heavy chain E 125 Homo Sapiens , Human Coronavirus Oc43 EVQLVESGGGLVKPGGSLRLSCVASGFSFSIYSMNWVRQAPGKGLEWVSYISSSSSYKYYADSVKGRFSVSRDNAKNSLYLQLNGLRAEDTAVYYCARDGYCPKGVCTYYGMDVWGQGTTVTVSA
1871 Fab heavy chain G 125 Homo Sapiens , Human Coronavirus Oc43 EVQLVESGGGLVKPGGSLRLSCVASGFSFSIYSMNWVRQAPGKGLEWVSYISSSSSYKYYADSVKGRFSVSRDNAKNSLYLQLNGLRAEDTAVYYCARDGYCPKGVCTYYGMDVWGQGTTVTVSA
1871 Fab heavy chain H 125 Homo Sapiens , Human Coronavirus Oc43 EVQLVESGGGLVKPGGSLRLSCVASGFSFSIYSMNWVRQAPGKGLEWVSYISSSSSYKYYADSVKGRFSVSRDNAKNSLYLQLNGLRAEDTAVYYCARDGYCPKGVCTYYGMDVWGQGTTVTVSA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-13
Deposition Author(s): Jackman, M.J. , Julien, J.P. , Muthuraman, K.