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FASTA Sequence PDB Format mmCIF Format
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9MXI

Crystal structure of synthetic antibody, cop-2, in complex with the c-terminal domain of clostridium perfringens enterotoxin

PDB DOI: 10.2210/pdb9mxi/pdb

Classification: IMMUNE SYSTEM/TOXIN
Organism(s): Clostridium Perfringens , Synthetic Construct

Deposited: 2025-01-20
Deposition Author(s): Kapoor, S. , Ogbu, C.P. , Vecchio, A.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

Literature

Crystal structure of synthetic antibody, cop-2, in complex with the c-terminal domain of clostridium perfringens enterotoxin

Kapoor, S. , Ogbu, C.P. , Vecchio, A.J.

Primary Citation of Related Structures: 9MXI


Proteins
Molecule Chains Sequence Length Organism Sequence
COP-2 antibody light chain B 239 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
COP-2 antibody light chain D 239 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
COP-2 antibody light chain F 239 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Heat-labile enterotoxin B chain G 134 Clostridium Perfringens , Synthetic Construct MSTDIEKEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKFGLVPR
Heat-labile enterotoxin B chain H 134 Clostridium Perfringens , Synthetic Construct MSTDIEKEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKFGLVPR
Heat-labile enterotoxin B chain I 134 Clostridium Perfringens , Synthetic Construct MSTDIEKEILDLAAATERLNLTDALNSNPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPYSILFQKFGLVPR
COP-2 antibody heavy chain A 260 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
COP-2 antibody heavy chain C 260 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
COP-2 antibody heavy chain E 260 Clostridium Perfringens , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-01-20
Deposition Author(s): Kapoor, S. , Ogbu, C.P. , Vecchio, A.J.