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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9CYH

Cryo-em structure of da03e17 fab in complex with influenza virus neuraminidase from b/colorado/06/2017

PDB DOI: 10.2210/pdb9cyh/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Ancestral Gene

Deposited: 2024-08-02
Deposition Author(s): Jo, G. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.47 Å

9cyh
Literature

Cryo-em structure of da03e17 fab in complex with influenza virus neuraminidase from b/colorado/06/2017

Jo, G. , Ward, A.B.

Primary Citation of Related Structures: 9CYH


Proteins
Molecule Chains Sequence Length Organism Sequence
DA03E17 Fab heavy chain H 231 Salmonella Enterica , Ancestral Gene EVQLVESGPGLVKPSQTLSLTCTVSGGSFSSGGYLWSWVRQHPGKGLEWIGYILYSGSPYYNPSLESRATISLDTSKNQFSLRLISVTAADAAMYYCARVDGSGNTDRYYFYGMDVWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
DA03E17 Fab heavy chain E 231 Salmonella Enterica , Ancestral Gene EVQLVESGPGLVKPSQTLSLTCTVSGGSFSSGGYLWSWVRQHPGKGLEWIGYILYSGSPYYNPSLESRATISLDTSKNQFSLRLISVTAADAAMYYCARVDGSGNTDRYYFYGMDVWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
DA03E17 Fab heavy chain F 231 Salmonella Enterica , Ancestral Gene EVQLVESGPGLVKPSQTLSLTCTVSGGSFSSGGYLWSWVRQHPGKGLEWIGYILYSGSPYYNPSLESRATISLDTSKNQFSLRLISVTAADAAMYYCARVDGSGNTDRYYFYGMDVWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
DA03E17 Fab heavy chain G 231 Salmonella Enterica , Ancestral Gene EVQLVESGPGLVKPSQTLSLTCTVSGGSFSSGGYLWSWVRQHPGKGLEWIGYILYSGSPYYNPSLESRATISLDTSKNQFSLRLISVTAADAAMYYCARVDGSGNTDRYYFYGMDVWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
DA03E17 Fab light chain L 215 Salmonella Enterica , Ancestral Gene DIQMTQSPSSVSASVGDRVTITCRASRGIGDWLAWYQQKPGKAPKLLIYAASSLQRGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQADGWEVWTFGQGTKVDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DA03E17 Fab light chain I 215 Salmonella Enterica , Ancestral Gene DIQMTQSPSSVSASVGDRVTITCRASRGIGDWLAWYQQKPGKAPKLLIYAASSLQRGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQADGWEVWTFGQGTKVDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DA03E17 Fab light chain J 215 Salmonella Enterica , Ancestral Gene DIQMTQSPSSVSASVGDRVTITCRASRGIGDWLAWYQQKPGKAPKLLIYAASSLQRGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQADGWEVWTFGQGTKVDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DA03E17 Fab light chain K 215 Salmonella Enterica , Ancestral Gene DIQMTQSPSSVSASVGDRVTITCRASRGIGDWLAWYQQKPGKAPKLLIYAASSLQRGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQADGWEVWTFGQGTKVDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Neuraminidase A 482 Salmonella Enterica , Ancestral Gene MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGPEPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFVACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNRYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESDGDKGSGGIKGGFVHQRMKSKIGRWYSRTMSQTERMGMGLYVKYGGDPWADSDALAFSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL
Neuraminidase B 482 Salmonella Enterica , Ancestral Gene MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGPEPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFVACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNRYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESDGDKGSGGIKGGFVHQRMKSKIGRWYSRTMSQTERMGMGLYVKYGGDPWADSDALAFSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL
Neuraminidase C 482 Salmonella Enterica , Ancestral Gene MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGPEPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFVACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNRYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESDGDKGSGGIKGGFVHQRMKSKIGRWYSRTMSQTERMGMGLYVKYGGDPWADSDALAFSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL
Neuraminidase D 482 Salmonella Enterica , Ancestral Gene MYSMQLASCVTLTLVLLVNSQHHHHHHGSAWSHPQFEKGGSSSDYSDLQRVKQELLEEVKKELQKVKEEIIEAFVQELRKRGSLVPRGSGGPEPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFVACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNRYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESDGDKGSGGIKGGFVHQRMKSKIGRWYSRTMSQTERMGMGLYVKYGGDPWADSDALAFSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-02
Deposition Author(s): Jo, G. , Ward, A.B.