Hiv 16055.v8.3 sosip env in complex with v2 epitope and anti-immune complex pabs from rabbit 2464
PDB DOI: 10.2210/pdb9atz/pdb
Classification: VIRAL PROTEIN Organism(s): Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris
Deposited: 2024-02-27 Deposition Author(s): Antansijevic, A. , Brown, S. , Ward, A.B.
Hiv 16055.v8.3 sosip env in complex with v2 epitope and anti-immune complex pabs from rabbit 2464
Antansijevic, A. , Brown, S. , Ward, A.B.
Primary Citation of Related Structures: 9ATZ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Rabbit V2 Polyclonal Antibody - Predicted Light Chain | A | 108 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit V2 Polyclonal Antibody - Predicted Light Chain | F | 108 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit V2 Polyclonal Antibody - Predicted Light Chain | N | 108 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit Anti-Immune Complex Antibody - Predicted Light Chain | B | 112 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit Anti-Immune Complex Antibody - Predicted Light Chain | G | 112 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit Anti-Immune Complex Antibody - Predicted Light Chain | K | 112 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit V2 Polyclonal Antibody - Predicted Heavy Chain | C | 125 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit V2 Polyclonal Antibody - Predicted Heavy Chain | H | 125 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit V2 Polyclonal Antibody - Predicted Heavy Chain | L | 125 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Surface protein gp120 | D | 514 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARNGNLWVTVYYGVPVWKDAETTLFCASDAKAYEKEKRNVWATHCCVPTDPNPQEMVLENVTENFNMWKNDMVEQMHEDVISLWDQSLKPCVKLTPLCVTLECRQVNTTNATSSVNVTNGEEIKNCSFNATTELRDKKQKVYALFYRLDIVPLEEERKGNSSKYRLINCNTSAITQACPKVTFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTIIVHLNESVEIVCTRPNNNTVKSIRIGPGQWFYYTGDIIGNIRQAYCNIKKDDWIRTLQRVGKKLAEHFPRRIINFTQPAGGDLEITTHSFNCRGEFFYCNTSSLFNSTYNPNDTNSNSSSSNSSLDITIPCRIKQIINMWQRVGQAMYAPPIEGNITCKSNITGLLLVRDGGVESNETEIFRPGGGDMRNNWRSELYKYKVVEIKPLGIAPTRCKRRVVERRRR |
Surface protein gp120 | I | 514 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARNGNLWVTVYYGVPVWKDAETTLFCASDAKAYEKEKRNVWATHCCVPTDPNPQEMVLENVTENFNMWKNDMVEQMHEDVISLWDQSLKPCVKLTPLCVTLECRQVNTTNATSSVNVTNGEEIKNCSFNATTELRDKKQKVYALFYRLDIVPLEEERKGNSSKYRLINCNTSAITQACPKVTFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTIIVHLNESVEIVCTRPNNNTVKSIRIGPGQWFYYTGDIIGNIRQAYCNIKKDDWIRTLQRVGKKLAEHFPRRIINFTQPAGGDLEITTHSFNCRGEFFYCNTSSLFNSTYNPNDTNSNSSSSNSSLDITIPCRIKQIINMWQRVGQAMYAPPIEGNITCKSNITGLLLVRDGGVESNETEIFRPGGGDMRNNWRSELYKYKVVEIKPLGIAPTRCKRRVVERRRR |
Surface protein gp120 | M | 514 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARNGNLWVTVYYGVPVWKDAETTLFCASDAKAYEKEKRNVWATHCCVPTDPNPQEMVLENVTENFNMWKNDMVEQMHEDVISLWDQSLKPCVKLTPLCVTLECRQVNTTNATSSVNVTNGEEIKNCSFNATTELRDKKQKVYALFYRLDIVPLEEERKGNSSKYRLINCNTSAITQACPKVTFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTIIVHLNESVEIVCTRPNNNTVKSIRIGPGQWFYYTGDIIGNIRQAYCNIKKDDWIRTLQRVGKKLAEHFPRRIINFTQPAGGDLEITTHSFNCRGEFFYCNTSSLFNSTYNPNDTNSNSSSSNSSLDITIPCRIKQIINMWQRVGQAMYAPPIEGNITCKSNITGLLLVRDGGVESNETEIFRPGGGDMRNNWRSELYKYKVVEIKPLGIAPTRCKRRVVERRRR |
Rabbit Anti-Immune Complex Antibody - Predicted Heavy Chain | E | 111 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit Anti-Immune Complex Antibody - Predicted Heavy Chain | J | 111 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Rabbit Anti-Immune Complex Antibody - Predicted Heavy Chain | R | 111 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
Transmembrane protein gp41 | O | 155 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | RRAVGLGAVSFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPECQQHLLQDGHWGIKQLQTRVLAIEHYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSHDEIWGNMTWMQWDREISNYTNTIYRLLEDSQNQQEQNEKDLLALD |
Transmembrane protein gp41 | P | 155 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | RRAVGLGAVSFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPECQQHLLQDGHWGIKQLQTRVLAIEHYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSHDEIWGNMTWMQWDREISNYTNTIYRLLEDSQNQQEQNEKDLLALD |
Transmembrane protein gp41 | Q | 155 | Anoxybacillus Sp. Lm18-11 , Halomicronema Hongdechloris | RRAVGLGAVSFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPECQQHLLQDGHWGIKQLQTRVLAIEHYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSHDEIWGNMTWMQWDREISNYTNTIYRLLEDSQNQQEQNEKDLLALD |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-02-27 Deposition Author(s): Antansijevic, A. , Brown, S. , Ward, A.B.