Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1d6
PDB DOI: 10.2210/pdb8xn9/pdb
Classification: ANTIVIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Henipavirus Nipahense , Macaca
Deposited: 2023-12-29 Deposition Author(s): Chen, W. , Fan, P.F. , Ren, Y. , Yu, C.M.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Fusion glycoprotein F0 | A | 502 | Henipavirus Nipahense , Macaca | ETGGILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSNMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDNSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLDGTMKQIEDKIEEILSKIYHIENEIARIKKLIGEGGSHHHHHH |
Fusion glycoprotein F0 | B | 502 | Henipavirus Nipahense , Macaca | ETGGILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSNMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDNSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLDGTMKQIEDKIEEILSKIYHIENEIARIKKLIGEGGSHHHHHH |
Fusion glycoprotein F0 | C | 502 | Henipavirus Nipahense , Macaca | ETGGILHYEKLSKIGLVKGVTRKYKIKSNPLTKDIVIKMIPNVSNMSQCTGSVMENYKTRLNGILTPIKGALEIYKNNTHDLVGDVRLAGVIMAGVAIGIATAAQITAGVALYEAMKNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYINTNLVPTIDKISCKQTELSLDLALSKYLSDLLFVFGPNLQDPVSNSMTIQAISQAFGGNYETLLRTLGYATEDFDDLLESDSITGQIIYVDLSSYYIIVRVYFPILTEIQQAYIQELLPVSFNNDNSEWISIVPNFILVRNTLISNIEIGFCLITKRSVICNQDYATPMTNNMRECLTGSTEKCPRELVVSSHVPRFALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGSVNYNSEGIAIGPPVFTDKVDISSQISSMNQSLQQSKDYIKEAQRLLDGTMKQIEDKIEEILSKIYHIENEIARIKKLIGEGGSHHHHHH |
1D6 VH | D | 211 | Henipavirus Nipahense , Macaca | PVLTQPPSASEAARKSVTISCSGSSSNIGSNSVSWYQQLPGTALKLLISYNDQRASGVSDRFSGSKSGTSASLAISGLQTEDEADYYCAAWDDSLSGPVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAP |
1D6 VH | E | 211 | Henipavirus Nipahense , Macaca | PVLTQPPSASEAARKSVTISCSGSSSNIGSNSVSWYQQLPGTALKLLISYNDQRASGVSDRFSGSKSGTSASLAISGLQTEDEADYYCAAWDDSLSGPVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAP |
1D6 VH | F | 211 | Henipavirus Nipahense , Macaca | PVLTQPPSASEAARKSVTISCSGSSSNIGSNSVSWYQQLPGTALKLLISYNDQRASGVSDRFSGSKSGTSASLAISGLQTEDEADYYCAAWDDSLSGPVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAP |
1D6 VL | G | 239 | Henipavirus Nipahense , Macaca | QVQLQESGPGLVKPSETLSLTCTVSGASISSYWWGWIRQPPGKGLEWIADIYPNSGSTNYNPSLKSRVTNSKDASKNQFSLKLSSVTAADTAMYYCARAPRGYSYSYVFGHRFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH |
1D6 VL | H | 239 | Henipavirus Nipahense , Macaca | QVQLQESGPGLVKPSETLSLTCTVSGASISSYWWGWIRQPPGKGLEWIADIYPNSGSTNYNPSLKSRVTNSKDASKNQFSLKLSSVTAADTAMYYCARAPRGYSYSYVFGHRFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH |
1D6 VL | I | 239 | Henipavirus Nipahense , Macaca | QVQLQESGPGLVKPSETLSLTCTVSGASISSYWWGWIRQPPGKGLEWIADIYPNSGSTNYNPSLKSRVTNSKDASKNQFSLKLSSVTAADTAMYYCARAPRGYSYSYVFGHRFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH |
Method: ELECTRON MICROSCOPY