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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8WFX

Cryo-em structure of crispr-csm effector complex from mycobacterium canettii

PDB DOI: 10.2210/pdb8wfx/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Mycobacterium Canettii

Deposited: 2023-09-20
Deposition Author(s): Huo, Y. , Jiang, T. , Ma, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å

8wfx
Literature

Cryo-em structure of crispr-csm effector complex from mycobacterium canettii

Huo, Y. , Jiang, T. , Ma, X.

Primary Citation of Related Structures: 8WFX


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR system Cms protein Csm4 M 302 Mycobacterium Canettii MNSRLFRFDVVRTHFGDHGLESSTIGCPADTLYSALCVEALRMGGQQLLDELVACSTLRLTDLLPYVGPDYLVPKPLKSVRSDSSSLQKKLAKKIGFLPAAQLGSFLDGTADLDDLAARQTKIGVHAVSAKAAIHNGKKDADPYRVGYFRFEPDAGLWLLATGSESELGLLTRLLKGISALGGERTSGFGAFIPTESEVPAALTPTTAAASLMTLTTSLPTDDELEQALAGATYRLVKRSGFVASATYAETPRRKRDIYKLAAGSVFSRPFQGGILDVSLGGNHPVYSYARPLFLALPESAA
CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A) A 813 Mycobacterium Canettii MIPALIETVIGCLLHDIGKPVQRAALGYRGRHSAIGRAFVKKIWLRDGRNPSEFADEVYEPDIEVFDRRILDAISYHHSSALRTAAENGRLAADAPAYVAYIADNIAAGTDRRKADSDDGQGASTWDSDTPLYSVFNRFGADTANLTFAPEMLDDREPMNIPSARRIEFDKYRYTEIVNKLEAVLVDLECSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHYLQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTEFARNSLEEFEREANEWLLENFATWLFIATGSVPLAANDLMRRPNESGPQAHDRALRYSGLYRELSEQLSAKKLARYSADQLRELNSSDHDGQKGDRECSVCHTVNRTIKTINDLLLCSLCQALTAASQQIQSESRRFLLISEESSDGLPLPFGATLTFCSESGAKQALQQPQTRRLYAKNKFFAGESLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVDNLGQAFTHGFMKQGNGKFNTISRTAAFSRMLSLFFRQHINYVLKHPKLRPLTGDDPERSRRATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEGAAKSLPGKNGVALFDPEFTFRWDELLSKVIEEKYRHIADYFRCNEERGMAFIYKLLELLDQRGDRITEARWVYFLMRMRGPTDDTTRFQQFANRLHQWFQDPSDAKQLKTALHLYIYRNRKEESE
CRISPR system Cms protein Csm5 N 375 Mycobacterium Canettii MSQYLKPFELTLRCLGPVFIGSGEKRTPKEYVASTSMVYFPDMERLYADVAAQGKSESFEEFMMNTGKAQPDERFNEWIAENGVKVSPKNHGGYGVKIGSIVPGRAHRGRDGQMIQEQRQLNDIHSFIKDVLGNPYVPGSSVKGMLRSIYLQSLVHQRTAQPVRVPGHQTREHRQYGERFERKELRKSGRPNTRPQDAVNDLFQAIRVTDSPGLRTSDLLICQKMDVNVHGKPDGLPLFRECLAPGTSISLRVVVDTSPTARGGWPAGERFLETLSDTVAFVNKARYAEYAAKYWDDDPQFGPIVYLGGGAGYRSKTFVTQQDDMAKVLDAQFPKIKHVAKTRDLGVSPLVLKLTKIGDKYYEMGQCELSIRRAE
CRISPR system Cms protein Csm2 E 130 Mycobacterium Canettii MSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
CRISPR system Cms protein Csm2 C 130 Mycobacterium Canettii MSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
CRISPR system Cms protein Csm2 B 130 Mycobacterium Canettii MSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
CRISPR system Cms protein Csm2 D 130 Mycobacterium Canettii MSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
CRISPR system Cms protein Csm2 F 130 Mycobacterium Canettii MSVIQDDYVKQAEQVIRGLPKKNGDFELTTTQLRVLLSLTAQLFDEAQLSSDQNLSPALRDKVQYLRVRFVYQAGREKAVRVFVERAGLLDELAQIGDSRDRLLKFCHYMEALVAYKKFLDPKETSKETE
CRISPR system Cms endoribonuclease Csm3 I 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV
CRISPR system Cms endoribonuclease Csm3 J 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV
CRISPR system Cms endoribonuclease Csm3 K 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV
CRISPR system Cms endoribonuclease Csm3 L 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV
CRISPR system Cms endoribonuclease Csm3 G 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV
CRISPR system Cms endoribonuclease Csm3 H 236 Mycobacterium Canettii MITGYAKIEITGTITVVTGLHIGAGDGFSAIGAVDKPVVRDPLTKWPMIPGTSLKGKVRTLLSRQYGADTETFYRKPNDDPAQIRRLFGDTKEYKTGRLVFRDTKLTNKDDLEARGAKTLTEVKFENAINRVTAKANPRQMERVIPGSEFAFSLVYEVSFGTPDEEQKASLPSSDEIIEDFNAIARGLKLLELDYLGGSGTRGYGQVKFSDLKARAAVGTLDRSLLEMLNHELAAV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (50-MER) o 50 NA ACGGAAACUUAAAACCGUGUUGCACUGCAACCCGGAAUUCUUGCACGUCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-09-20
Deposition Author(s): Huo, Y. , Jiang, T. , Ma, X.