Cryo-em structure of phage dev ejection proteins gp72:gp73
PDB DOI: 10.2210/pdb8vxq/pdb
Classification: VIRAL PROTEIN Organism(s): Pseudomonas Phage Vb_Paep_Dev
Deposited: 2024-02-05 Deposition Author(s): Cingolani, G. , Iglesias, S.M.
Cryo-em structure of phage dev ejection proteins gp72:gp73
Cingolani, G. , Iglesias, S.M.
Primary Citation of Related Structures: 8VXQ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
gp72 | R | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | J | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | K | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | L | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | M | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | N | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | O | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | P | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
gp72 | Q | 521 | Pseudomonas Phage Vb_Paep_Dev | MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLSAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR |
N4 gp52-like protein | A | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | B | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | C | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | D | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | E | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | F | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | G | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | H | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
N4 gp52-like protein | I | 155 | Pseudomonas Phage Vb_Paep_Dev | MAYPYSDMPFGVELDTSTLGSFGLGGPQTQLQMQMPAVDVNAAASGSGGFMAGFSNIFSRDSMFGGVAPSGAQTGGWVLPALGIGQAVFGAIGANRQQRAARDQLAESRRQFDMNYGAQRQSINTNLEDRQRARVASNPTAYESVDSYMERNRIR |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-02-05 Deposition Author(s): Cingolani, G. , Iglesias, S.M.