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8VM9

The crystal structure of rhinovirus b14 rna replication element sd-loop mutant in complex with fab bl3-6

PDB DOI: 10.2210/pdb8vm9/pdb

Classification: RNA/Immune System
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-01-13
Deposition Author(s): Das, N.K. , Koirala, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

Literature

The crystal structure of rhinovirus b14 rna replication element sd-loop mutant in complex with fab bl3-6

Das, N.K. , Koirala, D.

Primary Citation of Related Structures: 8VM9


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (85-MER) r 85 NA GGAAACAGCGGAUGGGUAUCCCACCAUUCGACCCAUUGGGUGUAGUACUCUGGUACGAAACACGUACCUUUGUACGCCUGUUUCC
RNA (85-MER) c 85 NA GGAAACAGCGGAUGGGUAUCCCACCAUUCGACCCAUUGGGUGUAGUACUCUGGUACGAAACACGUACCUUUGUACGCCUGUUUCC

Proteins
Molecule Chains Sequence Length Organism Sequence
Heavy Chain of Fab BL3-6 A 233 Homo Sapiens , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Heavy Chain of Fab BL3-6 H 233 Homo Sapiens , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
Light Chain of Fab BL3-6 B 215 Homo Sapiens , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Light Chain of Fab BL3-6 L 215 Homo Sapiens , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-13
Deposition Author(s): Das, N.K. , Koirala, D.