Crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody cc25.43
PDB DOI: 10.2210/pdb8sdg/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2023-04-06 Deposition Author(s): Wilson, I.A. , Yuan, M.
Crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody cc25.43
Primary Citation of Related Structures: 8SDG
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Neutralizing antibody CC25.43 heavy chain | G | 226 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGLVQPGGSLKLSCSASGFTLSDSAMHWVRQASGKGLEWVGRISSNVNNDATVYAASLKGRFTISRDESKNMAYLQMNSLKNEDTAVYYCTVVPVLEYYQYGMDVWGQGTTVTIFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
Neutralizing antibody CC25.43 heavy chain | A | 226 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGLVQPGGSLKLSCSASGFTLSDSAMHWVRQASGKGLEWVGRISSNVNNDATVYAASLKGRFTISRDESKNMAYLQMNSLKNEDTAVYYCTVVPVLEYYQYGMDVWGQGTTVTIFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
Neutralizing antibody CC25.43 light chain | I | 215 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIQLTQSPSTLSASVGDRVIITCRASQSISTWLAWYQQRPGQAPKLLIYKASILQSGVPPRFSGSGSGTDFTLTISRLQPDDFATYYCQQYDSDSQPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGECS |
Neutralizing antibody CC25.43 light chain | B | 215 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIQLTQSPSTLSASVGDRVIITCRASQSISTWLAWYQQRPGQAPKLLIYKASILQSGVPPRFSGSGSGTDFTLTISRLQPDDFATYYCQQYDSDSQPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGECS |
Spike protein S1 | C | 205 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH |
Spike protein S1 | D | 205 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH |
Method: X-RAY DIFFRACTION
Deposited Date: 2023-04-06 Deposition Author(s): Wilson, I.A. , Yuan, M.