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FASTA Sequence PDB Format mmCIF Format
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8DZJ

Cryo-em structure of acidibacillus sulfuroxidans cas12f in complex with sgrna and target dna

PDB DOI: 10.2210/pdb8dzj/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Acidibacillus Sulfuroxidans , Synthetic Construct

Deposited: 2022-08-07
Deposition Author(s): Liu, C. , Zhao, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Literature

Cryo-em structure of acidibacillus sulfuroxidans cas12f in complex with sgrna and target dna

Liu, C. , Zhao, M.

Primary Citation of Related Structures: 8DZJ


Proteins
Molecule Chains Sequence Length Organism Sequence
OrfB_Zn_ribbon domain-containing protein A 446 Acidibacillus Sulfuroxidans , Synthetic Construct MAHHHHHHSAALEVLFQGPGYQDPMIKVYRYEIVKPLDLDWKEFGTILRQLQQETRFALNKATQLAWEWMGFSSDYKDNHGEYPKSKDILGYTNVHGYAYHTIKTKAYRLNSGNLSQTIKRATDRFKAYQKEILRGDMSIPSYKRDIPLDLIKENISVNRMNHGDYIASLSLLSNPAKQEMNVKRKISVIIIVRGAGKTIMDRILSGEYQVSASQIIHDDRKNKWYLNISYDFEPQTRVLDLNKIMGIALGVAVAVYMAFQHTPARYKLEGGEIENFRRQVESRRISMLRQGKYAGGARGGHGRDKRIKPIEQLRDKIANFRDTTNHRYSRYIVDMAIKEGCGTIQMEDLTNIRDIGSRFLQNWTYYDLQQKIIYKAEEAGIKVIKIDPQYTSQRCSECGNIDSGNRIGQAIFKCRACGYEANADYNAARNIAIPNIDKIIAESIK
OrfB_Zn_ribbon domain-containing protein B 446 Acidibacillus Sulfuroxidans , Synthetic Construct MAHHHHHHSAALEVLFQGPGYQDPMIKVYRYEIVKPLDLDWKEFGTILRQLQQETRFALNKATQLAWEWMGFSSDYKDNHGEYPKSKDILGYTNVHGYAYHTIKTKAYRLNSGNLSQTIKRATDRFKAYQKEILRGDMSIPSYKRDIPLDLIKENISVNRMNHGDYIASLSLLSNPAKQEMNVKRKISVIIIVRGAGKTIMDRILSGEYQVSASQIIHDDRKNKWYLNISYDFEPQTRVLDLNKIMGIALGVAVAVYMAFQHTPARYKLEGGEIENFRRQVESRRISMLRQGKYAGGARGGHGRDKRIKPIEQLRDKIANFRDTTNHRYSRYIVDMAIKEGCGTIQMEDLTNIRDIGSRFLQNWTYYDLQQKIIYKAEEAGIKVIKIDPQYTSQRCSECGNIDSGNRIGQAIFKCRACGYEANADYNAARNIAIPNIDKIIAESIK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
target DNA strand c 42 NA TTCCGGCCTGGATTGTGGGTCTTGAGAGCAAAAACCTGTTTT
Non-target DNA strand d 42 NA AAAACAGGTTTTTGCTCTCAAGACCCACAATCCAGGCCGGAA
sgRNA e 193 NA GGAUUCGUCGGUUCAGCGACGAUAAGCCGAGAAGUGCCAAUAAAACUGUUAAGUGGUUUGGUAACGCUCGGUAAGGUAGCCAAAAGGCUGAAACUCCGUGCACAAAGACCGCACGGACGCUUCACAUAUAGCUCAUAAACAAGGGUUUGCGAGCUAGCUUGUGGAGUGUGAACCUCUCAAGACCCACAAUCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-07
Deposition Author(s): Liu, C. , Zhao, M.