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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8DYT

Cryo-em structure of 227 fab in complex with (npna)8 peptide

PDB DOI: 10.2210/pdb8dyt/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Plasmodium Falciparum 3D7

Deposited: 2022-08-05
Deposition Author(s): Martin, G.M. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

8dyt
Literature

Cryo-em structure of 227 fab in complex with (npna)8 peptide

Martin, G.M. , Ward, A.B.

Primary Citation of Related Structures: 8DYT


Proteins
Molecule Chains Sequence Length Organism Sequence
Circumsporozoite protein I 32 Homo Sapiens , Plasmodium Falciparum 3D7 NPNANPNANPNANPNANPNANPNANPNANPNA
Circumsporozoite protein J 32 Homo Sapiens , Plasmodium Falciparum 3D7 NPNANPNANPNANPNANPNANPNANPNANPNA
227 Fab light chain L 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain B 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain D 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain F 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain N 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain P 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain R 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab light chain T 217 Homo Sapiens , Plasmodium Falciparum 3D7 QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNGNRPSGVPDRFSGSKSGTSVSLAITGLQAEDEADYYCQSYDSSLSAFVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
227 Fab heavy chain H 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain A 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain C 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain E 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain M 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain O 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain Q 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
227 Fab heavy chain S 453 Homo Sapiens , Plasmodium Falciparum 3D7 QVQLVQSGGGVVQPGRSLRLSCVTSGFTFPAFGMHWVRQAPGKGLEWVAVIWYDGSKKYYADSVRGRFTISRDNSRNTLYLQMHSLRAEDTAVYYCARVKNYESSGYSQCLDYWGQGVLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-08-05
Deposition Author(s): Martin, G.M. , Ward, A.B.