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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8D3L

Type i-c cas4-cas1-cas2 complex bound to a pam/pam prespacer

PDB DOI: 10.2210/pdb8d3l/pdb

Classification: HYDROLASE/DNA
Organism(s): Alkalihalobacillus Halodurans C-125 , Synthetic Construct

Deposited: 2022-06-01
Deposition Author(s): Dhingra, Y. , Juneja, P. , Sashital, D.G. , Suresh, S.K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.49 Å

8d3l
Literature

Type i-c cas4-cas1-cas2 complex bound to a pam/pam prespacer

Dhingra, Y. , Juneja, P. , Sashital, D.G. , Suresh, S.K.

Primary Citation of Related Structures: 8D3L


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas1 A 343 Alkalihalobacillus Halodurans C-125 , Synthetic Construct MKKLLNTLYVTQPDTYLSLDGDNVVLLKEQEKLGRLPLHNLEAIVGFGYTGASPALMGYCAERNISITFLTKNGRFLARVVGESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLRVNVEQFKATSQLLSVMMQEIRNCDSLESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGRSRRPPKDNVNAMLSFAYTLLANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKKENGAVLMTDEARKTFLKAWQTKKQEKITHPYLGEKMSWGLVPYVQALLLARFLRGDLDEYPPFLWK
CRISPR-associated endonuclease Cas1 B 343 Alkalihalobacillus Halodurans C-125 , Synthetic Construct MKKLLNTLYVTQPDTYLSLDGDNVVLLKEQEKLGRLPLHNLEAIVGFGYTGASPALMGYCAERNISITFLTKNGRFLARVVGESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLRVNVEQFKATSQLLSVMMQEIRNCDSLESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGRSRRPPKDNVNAMLSFAYTLLANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKKENGAVLMTDEARKTFLKAWQTKKQEKITHPYLGEKMSWGLVPYVQALLLARFLRGDLDEYPPFLWK
CRISPR-associated endonuclease Cas1 C 343 Alkalihalobacillus Halodurans C-125 , Synthetic Construct MKKLLNTLYVTQPDTYLSLDGDNVVLLKEQEKLGRLPLHNLEAIVGFGYTGASPALMGYCAERNISITFLTKNGRFLARVVGESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLRVNVEQFKATSQLLSVMMQEIRNCDSLESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGRSRRPPKDNVNAMLSFAYTLLANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKKENGAVLMTDEARKTFLKAWQTKKQEKITHPYLGEKMSWGLVPYVQALLLARFLRGDLDEYPPFLWK
CRISPR-associated endonuclease Cas1 D 343 Alkalihalobacillus Halodurans C-125 , Synthetic Construct MKKLLNTLYVTQPDTYLSLDGDNVVLLKEQEKLGRLPLHNLEAIVGFGYTGASPALMGYCAERNISITFLTKNGRFLARVVGESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLRVNVEQFKATSQLLSVMMQEIRNCDSLESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGRSRRPPKDNVNAMLSFAYTLLANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKKENGAVLMTDEARKTFLKAWQTKKQEKITHPYLGEKMSWGLVPYVQALLLARFLRGDLDEYPPFLWK
CRISPR-associated endonuclease Cas2 E 98 Alkalihalobacillus Halodurans C-125 , Synthetic Construct GSMLVLITYDVQTSSMGGTKRLRKVAKACQNYGQRVQNSVFECIVDSTQLTSLKLELTSLIDEEKDSLRIYRLGNNYKTKVEHIGAKPSIDLEDPLIF
CRISPR-associated endonuclease Cas2 F 98 Alkalihalobacillus Halodurans C-125 , Synthetic Construct GSMLVLITYDVQTSSMGGTKRLRKVAKACQNYGQRVQNSVFECIVDSTQLTSLKLELTSLIDEEKDSLRIYRLGNNYKTKVEHIGAKPSIDLEDPLIF
CRISPR-associated exonuclease Cas4 I 218 Alkalihalobacillus Halodurans C-125 , Synthetic Construct ASNEEDRYLMLSGLQHFQFCKRQWALIHIEQQWEENVRTIEGQHLHKKADQPFMKEKRGSKLTVRAMPIQSKNLQISGICDVVEFVQDSEGIELSGVSGSYKAFPVEYKRGKPKKGDEDIVQLVAQAMCLEEMLVCRIDKGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSICLPKLMNKRSVKRYIEGRLSE
CRISPR-associated exonuclease Cas4 J 218 Alkalihalobacillus Halodurans C-125 , Synthetic Construct ASNEEDRYLMLSGLQHFQFCKRQWALIHIEQQWEENVRTIEGQHLHKKADQPFMKEKRGSKLTVRAMPIQSKNLQISGICDVVEFVQDSEGIELSGVSGSYKAFPVEYKRGKPKKGDEDIVQLVAQAMCLEEMLVCRIDKGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSICLPKLMNKRSVKRYIEGRLSE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
PAM/PAM strand 2 g 33 NA GTTCTGGTGGTCCTCAGCTACGTTTTTTGAATT
PAM/PAM strand 1 h 32 NA CGTAGCTGAGGACCACCAGAACTTTTTTGAAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-01
Deposition Author(s): Dhingra, Y. , Juneja, P. , Sashital, D.G. , Suresh, S.K.