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7Z16
E. coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation
PDB DOI: 10.2210/pdb7z16/pdb
Classification: TRANSFERASE Organism(s): Escherichia Coli
Deposited: 2022-02-24 Deposition Author(s): Amstrup, S.K. , Boesen, T. , Brodersen, D.E. , Enghild, J.J. , Hove-Jensen, B. , Karlsen, J.L. , Skjerning, R.B. , Sofus, N.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.09 Å
E. coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation
Amstrup, S.K. , Boesen, T. , Brodersen, D.E. , Enghild, J.J. , Hove-Jensen, B. , Karlsen, J.L. , Skjerning, R.B. , Sofus, N.
Primary Citation of Related Structures: 7Z16
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Phosphonate C-P lyase system protein PhnG | A | 150 | Escherichia Coli | MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEVIRAAETGLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA |
| Phosphonate C-P lyase system protein PhnG | E | 150 | Escherichia Coli | MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEVIRAAETGLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH | B | 194 | Escherichia Coli | MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH | F | 194 | Escherichia Coli | MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI | C | 354 | Escherichia Coli | MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEKNHG |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI | G | 354 | Escherichia Coli | MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEKNHG |
| Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase | D | 281 | Escherichia Coli | MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ |
| Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase | H | 281 | Escherichia Coli | MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ |
| Putative phosphonates utilization ATP-binding protein PhnK | I | 291 | Escherichia Coli | MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDQPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQNENLYFQGQFGSWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Putative phosphonates utilization ATP-binding protein PhnK | J | 291 | Escherichia Coli | MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDQPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQNENLYFQGQFGSWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL | K | 226 | Escherichia Coli | MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS |
| Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL | L | 226 | Escherichia Coli | MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2022-02-24 Deposition Author(s): Amstrup, S.K. , Boesen, T. , Brodersen, D.E. , Enghild, J.J. , Hove-Jensen, B. , Karlsen, J.L. , Skjerning, R.B. , Sofus, N.