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FASTA Sequence PDB Format mmCIF Format
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7Y6L

The sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab816

PDB DOI: 10.2210/pdb7y6l/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2022-06-21
Deposition Author(s): Shirouzu, M. , Uchikubo, T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

Literature

The sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab816

Shirouzu, M. , Uchikubo, T.

Primary Citation of Related Structures: 7Y6L


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike glycoprotein A 1278 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQAAAGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGSSGRENLYFQGGGGSGLNDIFEAQKIEWHEGHHHHHH
Ab816 heavy chain H 264 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MDPKGSLSWRILLFLSLAFELSYGLEQVQLVQSGAEVKKPGESLMISCKASGYNFRNYWIAWVRQMPGKGLEWMGIIHPGDSDIRYRPSLQGHVTISADKSITTAYLQWGSLKASDTAMYYCTRITTDADSSGLFHYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
Ab816 light chain L 238 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 MDPKGSLSWRILLFLSLAFELSYGLEEIVLTQSPSTLSASVGDRVTITCRASQNIYTWLAWYQRKPGKAPKVLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSAWSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2022-06-21
Deposition Author(s): Shirouzu, M. , Uchikubo, T.