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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

7SQ1

Bg505.md39ts env trimer in complex with fab from antibody c05

PDB DOI: 10.2210/pdb7sq1/pdb

Classification: Viral Protein/Immune System
Organism(s): Human Immunodeficiency Virus 1 , Mus Musculus

Deposited: 2021-11-04
Deposition Author(s): Du, J. , Kulp, D.W. , Moore, A. , Pallesen, J. , Walker, S. , Xu, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Literature

Bg505.md39ts env trimer in complex with fab from antibody c05

Du, J. , Kulp, D.W. , Moore, A. , Pallesen, J. , Walker, S. , Xu, Z.

Primary Citation of Related Structures: 7SQ1


Proteins
Molecule Chains Sequence Length Organism Sequence
Transmembrane protein gp41 B 153 Human Immunodeficiency Virus 1 , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 D 153 Human Immunodeficiency Virus 1 , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 F 153 Human Immunodeficiency Virus 1 , Mus Musculus AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp160 C 472 Human Immunodeficiency Virus 1 , Mus Musculus ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp160 E 472 Human Immunodeficiency Virus 1 , Mus Musculus ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp160 G 472 Human Immunodeficiency Virus 1 , Mus Musculus ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
C05 Fab Light chain L 111 Human Immunodeficiency Virus 1 , Mus Musculus DIVLTQSPASLAVSPGQRATISCRPSESVDNYGISFMNWFQQKPGQPPKLLIYAASNRGSGVPARFTGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIK
C05 Fab Light chain I 111 Human Immunodeficiency Virus 1 , Mus Musculus DIVLTQSPASLAVSPGQRATISCRPSESVDNYGISFMNWFQQKPGQPPKLLIYAASNRGSGVPARFTGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIK
C05 Fab heavy chain H 122 Human Immunodeficiency Virus 1 , Mus Musculus EVKLEESGGGLVQAGGSMKLSCVASGFSLSNYWMNWVRQSPEKGLEWVAEIRLKPQNYATHYAESVKGRFSISRDDSRSTVYLQMNNLRAEDTGIYYCTRPGYYGHYAMDYWGQGTSVTVSS
C05 Fab heavy chain A 122 Human Immunodeficiency Virus 1 , Mus Musculus EVKLEESGGGLVQAGGSMKLSCVASGFSLSNYWMNWVRQSPEKGLEWVAEIRLKPQNYATHYAESVKGRFSISRDDSRSTVYLQMNNLRAEDTGIYYCTRPGYYGHYAMDYWGQGTSVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-11-04
Deposition Author(s): Du, J. , Kulp, D.W. , Moore, A. , Pallesen, J. , Walker, S. , Xu, Z.