7RMI
Sp6-11 biased agonist bound to active human neurokinin 1 receptor in complex with minigs/q70
PDB DOI: 10.2210/pdb7rmi/pdb
Classification: SIGNALING PROTEIN/MEMBRANE PROTEIN Organism(s): Homo Sapiens , Lama Glama , Synthetic Construct
Deposited: 2021-07-27 Deposition Author(s): Cheng, Y. , Daemgen, M.A. , Dror, R.O. , Faust, B. , Gondin, A.B. , Harris, J.A. , Manglik, A. , Suomivuori, C.M. , Thal, D. , Veldhuis, N.A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.2 Å
Sp6-11 biased agonist bound to active human neurokinin 1 receptor in complex with minigs/q70
Cheng, Y. , Daemgen, M.A. , Dror, R.O. , Faust, B. , Gondin, A.B. , Harris, J.A. , Manglik, A. , Suomivuori, C.M. , Thal, D. , Veldhuis, N.A.
Primary Citation of Related Structures: 7RMI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, with certain residues mutated to match Guanine nucleotide-binding protein G(q) subunit | A | 229 | Homo Sapiens , Lama Glama , Synthetic Construct | GIEKQLQKDKQVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENARRIFNDCKDIILQMNLREYNLV |
| Substance-P receptor | R | 418 | Homo Sapiens , Lama Glama , Synthetic Construct | DYKDDDDASIDMDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGAHEEEPEDGPKATPSSLDLTSNCSSRSDSKTMTESFSFSSNVLS |
| Substance P 6-11 | S | 7 | Homo Sapiens , Lama Glama , Synthetic Construct | QFFGLMX |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 370 | Homo Sapiens , Lama Glama , Synthetic Construct | MHHHHHHLEVLFQGPEDQVDPRLIDGKGSSGSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 68 | Homo Sapiens , Lama Glama , Synthetic Construct | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFC |
| Nanobody 35 | N | 142 | Homo Sapiens , Lama Glama , Synthetic Construct | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSGSEDQVDPRLIDGK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-07-27 Deposition Author(s): Cheng, Y. , Daemgen, M.A. , Dror, R.O. , Faust, B. , Gondin, A.B. , Harris, J.A. , Manglik, A. , Suomivuori, C.M. , Thal, D. , Veldhuis, N.A.