Complex between the fab arm of ab-3467 and the sars-cov-2 receptor binding domain (rbd)
PDB DOI: 10.2210/pdb7msq/pdb
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN Organism(s): Salmonella Enterica , Gammaretrovirus
Deposited: 2021-05-12 Deposition Author(s): Christ, D. , Langley, D.B.
Method: X-RAY DIFFRACTION Resolution: 2.29 Å
Complex between the fab arm of ab-3467 and the sars-cov-2 receptor binding domain (rbd)
Primary Citation of Related Structures: 7MSQ
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Spike protein S1 | A | 204 | Salmonella Enterica , Gammaretrovirus | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKGSHHHHHH |
Spike protein S1 | B | 204 | Salmonella Enterica , Gammaretrovirus | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKGSHHHHHH |
AB-3467 Fab Heavy Chain | D | 238 | Salmonella Enterica , Gammaretrovirus | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
AB-3467 Fab Heavy Chain | H | 238 | Salmonella Enterica , Gammaretrovirus | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
AB-3467 Fab Light Chain | E | 214 | Salmonella Enterica , Gammaretrovirus | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
AB-3467 Fab Light Chain | L | 214 | Salmonella Enterica , Gammaretrovirus | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION
Deposited Date: 2021-05-12 Deposition Author(s): Christ, D. , Langley, D.B.