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FASTA Sequence PDB Format mmCIF Format
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7MDT

Bg505 sosip.v5.2 in complex with the monoclonal antibody rh4o9.8 (as fab fragment)

PDB DOI: 10.2210/pdb7mdt/pdb

Classification: VIRAL PROTEIN
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2021-04-06
Deposition Author(s): Antanasijevic, A. , Nogal, B. , Ozorowski, G. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

7mdt
Literature

Bg505 sosip.v5.2 in complex with the monoclonal antibody rh4o9.8 (as fab fragment)

Antanasijevic, A. , Nogal, B. , Ozorowski, G. , Ward, A.B.

Primary Citation of Related Structures: 7MDT


Proteins
Molecule Chains Sequence Length Organism Sequence
Surface protein gp120 A 513 Human Immunodeficiency Virus 1 , Macaca Mulatta MKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Surface protein gp120 C 513 Human Immunodeficiency Virus 1 , Macaca Mulatta MKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Surface protein gp120 E 513 Human Immunodeficiency Virus 1 , Macaca Mulatta MKRGLCCVLLLCGAVFVSPSQEIHARFRRGARAENLWVTVYYGVPVWKDAETTLFCASDAKAYETKKHNVWATHCCVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQWFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Transmembrane protein gp41 B 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 D 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 F 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPECQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Rh4O9.8 monoclonal antibody Light Chain L 110 Human Immunodeficiency Virus 1 , Macaca Mulatta QAGLTQPPSASEAAGKSVTISCSGSSANIGSTSVSWYQQLPGTAPKLLIYYNDQRASGVSDRFSGSKSGTSASLAISGLQTEDEADYYCAAWDDNLSGRIFGGGTRLTVL
Rh4O9.8 monoclonal antibody Heavy Chain H 117 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLQESGGGLAQPGGSLRLTCEASGFTFGRDDMAWVRQALGKGLEWVSSISNSGNTIYYADPVKGRFSISRDNAKNSLSLQMNSLKIEDTAVYFCTRTLGDYYLDWGQGVQVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-04-06
Deposition Author(s): Antanasijevic, A. , Nogal, B. , Ozorowski, G. , Ward, A.B.