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7KFH

Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437

PDB DOI: 10.2210/pdb7kfh/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Elizabethkingia Sp. , Salmonella Enterica

Deposited: 2020-10-13
Deposition Author(s): Murin, C.D. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Literature

Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437

Murin, C.D. , Ward, A.B.

Primary Citation of Related Structures: 7KFH


Proteins
Molecule Chains Sequence Length Organism Sequence
Virion spike glycoprotein 1 A 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 B 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 C 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Antibody Fab EBOV-437 light chain J 215 Elizabethkingia Sp. , Salmonella Enterica QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Antibody Fab EBOV-437 light chain K 215 Elizabethkingia Sp. , Salmonella Enterica QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Antibody Fab EBOV-437 light chain L 215 Elizabethkingia Sp. , Salmonella Enterica QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
Virion spike glycoprotein 2 D 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 E 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 F 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Antibody Fab EBOV-437 heavy chain G 237 Elizabethkingia Sp. , Salmonella Enterica QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
Antibody Fab EBOV-437 heavy chain H 237 Elizabethkingia Sp. , Salmonella Enterica QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
Antibody Fab EBOV-437 heavy chain I 237 Elizabethkingia Sp. , Salmonella Enterica QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-13
Deposition Author(s): Murin, C.D. , Ward, A.B.