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7KF9

Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515

PDB DOI: 10.2210/pdb7kf9/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Elizabethkingia Sp. , Salmonella Enterica

Deposited: 2020-10-13
Deposition Author(s): Murin, C.D. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.4 Å

7kf9
Literature

Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515

Murin, C.D. , Ward, A.B.

Primary Citation of Related Structures: 7KF9


Proteins
Molecule Chains Sequence Length Organism Sequence
Antibody Fab EBOV-296 heavy chain G 254 Elizabethkingia Sp. , Salmonella Enterica MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
Antibody Fab EBOV-296 heavy chain I 254 Elizabethkingia Sp. , Salmonella Enterica MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
Antibody Fab EBOV-296 heavy chain H 254 Elizabethkingia Sp. , Salmonella Enterica MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
Virion spike glycoprotein 1 A 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 C 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 1 B 313 Elizabethkingia Sp. , Salmonella Enterica MDAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFT
Virion spike glycoprotein 2 D 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 F 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Virion spike glycoprotein 2 E 203 Elizabethkingia Sp. , Salmonella Enterica NNNTHHQDTGEESASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Antibody Fab EBOV-296 light chain J 234 Elizabethkingia Sp. , Salmonella Enterica MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Antibody Fab EBOV-296 light chain L 234 Elizabethkingia Sp. , Salmonella Enterica MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Antibody Fab EBOV-296 light chain K 234 Elizabethkingia Sp. , Salmonella Enterica MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-13
Deposition Author(s): Murin, C.D. , Ward, A.B.