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FASTA Sequence PDB Format mmCIF Format
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7KDE

Bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195

PDB DOI: 10.2210/pdb7kde/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2020-10-08
Deposition Author(s): Barnes, C.O. , Bjorkman, P.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.55 Å

7kde
Literature

Bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195

Barnes, C.O. , Bjorkman, P.J.

Primary Citation of Related Structures: 7KDE


Proteins
Molecule Chains Sequence Length Organism Sequence
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp41 A 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp41 B 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp41 C 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp120 E 479 Homo Sapiens , Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 F 479 Homo Sapiens , Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 G 479 Homo Sapiens , Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Ab 1485 Heavy Chain H 233 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Ab 1485 Heavy Chain J 233 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Ab 1485 Heavy Chain M 233 Homo Sapiens , Human Immunodeficiency Virus 1 EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
8ANC195 Fab Heavy Chain O 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 Fab Heavy Chain Q 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 Fab Heavy Chain S 244 Homo Sapiens , Human Immunodeficiency Virus 1 QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
8ANC195 Fab Light Chain P 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 Fab Light Chain R 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
8ANC195 Fab Light Chain T 215 Homo Sapiens , Human Immunodeficiency Virus 1 DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Ab 1485 Light Chain I 216 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Ab 1485 Light Chain L 216 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Ab 1485 Light Chain N 216 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-10-08
Deposition Author(s): Barnes, C.O. , Bjorkman, P.J.