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7D3V

Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by apobec3a

PDB DOI: 10.2210/pdb7d3v/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2020-09-21
Deposition Author(s): Cao, C.Y. , Lan, W.X. , Liu, Y.P.

Experimental Data Snapshot

Method: SOLUTION NMR
Resolution: N.A.

7d3v
Literature

Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by apobec3a

Cao, C.Y. , Lan, W.X. , Liu, Y.P.

Primary Citation of Related Structures: 7D3V


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA dC->dU-editing enzyme APOBEC-3A A 199 Homo Sapiens , Synthetic Construct MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLNSGFYGRHAQLRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGQPFQPWDGLDEHSQALSGRLRAILQNQGN
DNA dC->dU-editing enzyme APOBEC-3A B 199 Homo Sapiens , Synthetic Construct MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLNSGFYGRHAQLRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGQPFQPWDGLDEHSQALSGRLRAILQNQGN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3') c 10 NA ATTTTCAATT
DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3') d 10 NA ATTTTCAATT
Experimental Data

Method: SOLUTION NMR

Deposited Date: 2020-09-21
Deposition Author(s): Cao, C.Y. , Lan, W.X. , Liu, Y.P.